RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 HARS2P49590 506 aaKnown RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SLC18A2Q05940 514 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 TBCEQ15813 527 aaPredicted RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 ME3Q16798 604 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SYTL3Q4VX76 610 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 TTC39AQ5SRH9 613 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 WDR78Q5VTH9 848 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 HAUS3Q68CZ6 603 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 ZNF772Q68DY9 489 aaPredicted RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 MIS18BP1Q6P0N0 1132 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 AAGABQ6PD74 315 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 IL20RBQ6UXL0 311 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 ATF7IPQ6VMQ6 1270 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 PXKQ7Z7A4 578 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 ADSSL1Q8N142 457 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 GHDCQ8N2G8 530 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 NGEFQ8N5V2 710 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 NTN5Q8WTR8 489 aaPredicted RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 NOC3LQ8WTT2 800 aaKnown RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 WDR83Q9BRX9 315 aaKnown RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 TMPRSS5Q9H3S3 457 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SLC32A1Q9H598 525 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 ENTPD7Q9NQZ7 604 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 RNF146Q9NTX7 359 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 IL1RAPL1Q9NZN1 696 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 KIAA1456Q9P272 454 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 UTS2RQ9UKP6 389 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SCINQ9Y6U3 715 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 FAM135BQ49AJ0 1406 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SCAF11Q99590 1463 aaKnown RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 LRRC7Q96NW7 1537 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 DNMT1P26358 1616 aaKnown RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ITSN2Q9NZM3 1697 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 KIDINS220Q9ULH0 1771 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ARHGAP10A1A4S6 786 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 CGB1A6NKQ9 187 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 E5RJQ4 531 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 RHODO00212 210 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 PRPF4O43172 522 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 TLR2O60603 784 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 UGDHO60701 494 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 RNASEH2AO75792 299 aaKnown RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 TMCC1O94876 653 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 CBX6O95503 412 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 HEXAP06865 529 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 LAMP2P13473 410 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 KLRC2P26717 231 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 MPGP29372 298 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ICAM3P32942 547 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ARSFP54793 590 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 GHRHRQ02643 423 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 PMPCAQ10713 525 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 PIK3CD-AS1Q5SR53 167 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 BRINP3Q76B58 766 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 RRM2BQ7LG56 351 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 TADA2BQ86TJ2 420 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 IGFN1Q86VF2 1251 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 CCDC25Q86WR0 208 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ZDHHC23Q8IYP9 409 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ADGRF4Q8IZF3 695 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 KCNG4Q8TDN1 519 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 KLHL29Q96CT2 875 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 MSI2Q96DH6 328 aaKnown RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 SAAL1Q96ER3 474 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 SCNM1Q9BWG6 230 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 GLIS2Q9BZE0 524 aaPredicted RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 PDCL3Q9H2J4 239 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 RANBP17Q9H2T7 1088 aaKnown RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 PLEKHA5Q9HAU0 1116 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 ADARB2Q9NS39 739 aaKnown RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 C20orf141Q9NUB4 165 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 TMEM45AQ9NWC5 275 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 PIAS3Q9Y6X2 628 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 MSH6P52701 1360 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 TMEM94Q12767 1356 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 EHBP1L1Q8N3D4 1523 aa4.35□□□□□ -1.71
PTCH1-216ENST00000548379 INO80Q9ULG1 1556 aaPredicted RBP4.35□□□□□ -1.71
PTCH1-216ENST00000548379 TEX13CA0A0J9YWL9 993 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 DPPA5A6NC42 116 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 EBAG9O00559 213 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 RNMTO43148 476 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 PTP4A3O75365 173 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 TACC1O75410 805 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 MLYCDO95822 493 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 TOP3BO95985 862 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 GALTP07902 379 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 HSPA1AP0DMV8 641 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 HSPA1BP0DMV9 641 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 UNGP13051 313 aaPredicted RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 YWHAQP27348 245 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 EPHB2P29323 1055 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 BSGP35613 385 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SLC16A2P36021 539 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 CPOXP36551 454 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 CPA2P48052 419 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 CLCNKBP51801 687 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 EIF3BP55884 814 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 RPL7AP62424 266 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms