RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 DOLKQ9UPQ8 538 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 CSNK1G3Q9Y6M4 447 aa12.15□□□□□ -0.46
TRAFD1-205ENST00000548277 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 LRP4O75096 1905 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 IGLV3-10A0A075B6K4 115 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 YY2O15391 372 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 ANXA6P08133 673 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 CELA2BP08218 269 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 SLC20A2Q08357 652 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 ZNF805Q5CZA5 627 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 ARTNQ5T4W7 220 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 IRF2BP1Q8IU81 584 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 SLC35F3Q8IY50 421 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 PHACTR4Q8IZ21 702 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 BTN2A2Q8WVV5 523 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 GLMNQ92990 594 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 PGAP3Q96FM1 320 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 LENG8Q96PV6 779 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 HAPLN3Q96S86 360 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 CCDC3Q9BQI4 270 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 WRAP53Q9BUR4 548 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 CEP44Q9C0F1 390 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 CLPBQ9H078 707 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 MBNL1Q9NR56 388 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 CHMP5Q9NZZ3 219 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 PADI4Q9UM07 663 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 COQ6Q9Y2Z9 468 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 PAXBP1Q9Y5B6 917 aa12.14□□□□□ -0.47
TRAFD1-205ENST00000548277 CAPN8A6NHC0 703 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 TSPAN6O43657 245 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 AP1G1O43747 822 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 SLC28A2O43868 658 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 GJB6O95452 261 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 C6P13671 934 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 PRKCSHP14314 528 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 CYP11B1P15538 503 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 TSHRP16473 764 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 IGFALSP35858 605 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 EIF4A3P38919 411 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 GABRB2P47870 512 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 RPIAP49247 311 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 PFN3P60673 137 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 SPIDRQ14159 915 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 PTK2BQ14289 1009 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 POLD3Q15054 466 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 C15orf59Q2T9L4 293 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 MYLK3Q32MK0 819 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 PRICKLE2Q7Z3G6 844 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 JAMLQ86YT9 394 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 FAM71AQ8IYT1 594 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 ARL14Q8N4G2 192 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 ARHGEF2Q92974 986 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 TSACCQ96A04 125 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 CENPTQ96BT3 561 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 WBP1Q96G27 269 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 LRRC61Q9BV99 259 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 SLC13A1Q9BZW2 595 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 METTL5Q9NRN9 209 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 ZNF212Q9UDV6 495 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 OR12D3Q9UGF7 316 aa12.13□□□□□ -0.47
TRAFD1-205ENST00000548277 FAM72CH0Y354 149 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 K7ENP7 123 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 TPP1O14773 563 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 BUB1O43683 1085 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 TM7SF2O76062 418 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 MMEP08473 750 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 CTSEP14091 401 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 HGFP14210 728 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 BPIFB4P59827 614 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 SNRPD1P62314 119 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 PPARDQ03181 441 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 SRSF6Q13247 344 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 CLN3Q13286 438 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 TGIF1Q15583 401 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 KLHL40Q2TBA0 621 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 FAM72AQ5TYM5 149 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 NAA35Q5VZE5 725 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 FAM72DQ6L9T8 149 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 ESRP1Q6NXG1 681 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 INO80CQ6PI98 192 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 ENPP7Q6UWV6 458 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 GDPD4Q6W3E5 623 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 ZNF783Q6ZMS7 281 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 B3GNT8Q7Z7M8 397 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 FAM72BQ86X60 149 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 HID1Q8IV36 788 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 OR2AP1Q8NGE2 309 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 CXorf40AQ8TE69 158 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 EPAS1Q99814 870 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms