RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PIGNO95427 931 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CR2P20023 1033 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 C5AR1P21730 350 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HOXA6P31267 233 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FNTBP49356 437 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 DSC2Q02487 901 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SFSWAPQ12872 951 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CFAP58Q5T655 872 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NCEH1Q6PIU2 408 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GDPD4Q6W3E5 623 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CREG2Q8IUH2 290 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF567Q8N184 647 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CNTD1Q8N815 330 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PRELID2Q8N945 189 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FAM71DQ8N9W8 422 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NKD2Q969F2 451 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TUBGCP5Q96RT8 1024 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 CPEB1Q9BZB8 566 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 PABPC3Q9H361 631 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ATP13A3Q9H7F0 1226 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 NCKAP1Q9Y2A7 1128 aa14.66□□□□□ -0.06
TNFRSF1A-216ENST00000543995 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 A0A1W2PP55 124 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 ZNF217O75362 1048 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 SERPINA4P29622 427 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 BCL2L1Q07817 233 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 OASLQ15646 514 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RALGPS1Q5JS13 557 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 GSTA5Q7RTV2 222 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 LONP2Q86WA8 852 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 HDDC3Q8N4P3 179 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 MAGOHBQ96A72 148 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TEKT5Q96M29 485 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 KLHL32Q96NJ5 620 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FAM126AQ9BYI3 521 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 USP29Q9HBJ7 922 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 FBXL12Q9NXK8 326 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RNF14Q9UBS8 474 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 RSPH14Q9UHP6 348 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 TRHDEQ9UKU6 1024 aa14.65□□□□□ -0.06
TNFRSF1A-216ENST00000543995 EML5Q05BV3 1969 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CCDC163A0A0D9SF12 145 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RNASEH2AO75792 299 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 URI1O94763 535 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IFNB1P01574 187 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ITGAVP06756 1048 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SERPINF2P08697 491 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SP9P0CG40 484 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TDGF1P13385 188 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CES1P23141 567 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 STIP1P31948 543 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ACTN2P35609 894 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CD86P42081 329 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TPMTP51580 245 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 METAP1P53582 386 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GDF10P55107 478 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZNF528Q3MIS6 628 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 USP39Q53GS9 565 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZNF805Q5CZA5 627 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ANKRD20A2Q5SQ80 823 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ANKRD20A1Q5TYW2 823 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ANKRD20A3Q5VUR7 823 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ALG1LQ6GMV1 187 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ITPRIPL1Q6GPH6 555 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 DRICH1Q6PGQ1 229 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FAM124AQ86V42 546 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CAMK1DQ8IU85 385 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CCDC89Q8N998 374 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CCDC110Q8TBZ0 833 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PDCD6IPQ8WUM4 868 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RLN3Q8WXF3 142 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SPACA7Q96KW9 195 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZNF641Q96N77 438 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PRRX2Q99811 253 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SUV39H2Q9H5I1 410 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GLOD4Q9HC38 313 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CD93Q9NPY3 652 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ITM2CQ9NQX7 267 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CYP8B1Q9UNU6 501 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 INVSQ9Y283 1065 aa14.64□□□□□ -0.07
TNFRSF1A-216ENST00000543995 F5H423 210 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PLK4O00444 970 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 OPHN1O60890 802 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PHF2O75151 1096 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NFKB1P19838 968 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ITGB7P26010 798 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 KCNJ1P48048 391 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NIPAL4Q0D2K0 466 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CCDC15Q0P6D6 951 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FBXL19Q6PCT2 694 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ARHGEF18Q6ZSZ5 1173 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 USP30Q70CQ3 517 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 KBTBD6Q86V97 674 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 WDR5BQ86VZ2 330 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 AADATQ8N5Z0 425 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 KIF18AQ8NI77 898 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ARRDC2Q8TBH0 407 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms