RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 DKK3Q9UBP4 350 aa16.48■□□□□ 0.23
CIT-212ENST00000543239 PLXNA2O75051 1894 aa16.48■□□□□ 0.23
CIT-212ENST00000543239 ADAMTS9Q9P2N4 1935 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 C16orf96A6NNT2 1141 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 ZNF487B1APH4 448 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 NDUFA10O95299 355 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
CIT-212ENST00000543239 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 CSRP1P21291 193 aaKnown RBP16.47■□□□□ 0.23
CIT-212ENST00000543239 CD38P28907 300 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 RENBPP51606 427 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 NSUN2Q08J23 767 aaKnown RBP eCLIP16.47■□□□□ 0.23
CIT-212ENST00000543239 MMRN1Q13201 1228 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 PAFAH1B3Q15102 231 aaKnown RBP16.47■□□□□ 0.23
CIT-212ENST00000543239 SLC45A4Q5BKX6 768 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 ANKRD20A8PQ5CZ79 823 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 KIAA1161Q6NSJ0 714 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 HORMAD1Q86X24 394 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 VSIG1Q86XK7 387 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 TP53INP2Q8IXH6 220 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 ATPAF2Q8N5M1 289 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 NETO2Q8NC67 525 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 HCAR2Q8TDS4 363 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 EXOC2Q96KP1 924 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 KLHL32Q96NJ5 620 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 PSKH2Q96QS6 385 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 TUBGCP5Q96RT8 1024 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 AASDHPPTQ9NRN7 309 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 IMPACTQ9P2X3 320 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 SEPT3Q9UH03 358 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 ANKRD6Q9Y2G4 727 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 PCDHA13Q9Y5I0 950 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 FADS3Q9Y5Q0 445 aa16.47■□□□□ 0.23
CIT-212ENST00000543239 A0A0A6YYK5 440 aaPredicted RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 A0A1W2PQU0 124 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 A0A1W2PR77 199 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 SOWAHDA6NJG2 315 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 PRAMEF26H0Y7S4 382 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 TSPAN6O43657 245 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 MAFKO60675 156 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 PCDH8O95206 1070 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 KDELR1P24390 212 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 MAT2AP31153 395 aaKnown RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 HSPA9P38646 679 aaKnown RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 SUOXP51687 545 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 C21orf59P57076 290 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 OVGP1Q12889 678 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 LBRQ14739 615 aaKnown RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 KIF19Q2TAC6 998 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 ZNF284Q2VY69 593 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 HLA-BQ31612 363 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 TMEM259Q4ZIN3 620 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 ZFYVE27Q5T4F4 411 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 NCBP2-AS2Q69YL0 99 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 IQCHQ86VS3 1027 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 TSEN2Q8NCE0 465 aaKnown RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 OR2I1PQ8NGU4 316 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 PCDH19Q8TAB3 1148 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 FEM1CQ96JP0 617 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 ZNF641Q96N77 438 aaPredicted RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 GAREM1Q9H706 876 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 KLHL11Q9NVR0 708 aa16.46■□□□□ 0.23
CIT-212ENST00000543239 EPN1Q9Y6I3 576 aaPredicted RBP16.46■□□□□ 0.23
CIT-212ENST00000543239 TSPAN11A1L157 253 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 MFSD11O43934 449 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 PEX11BO96011 259 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 ABL2P42684 1182 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 CTSKP43235 329 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 RPS21P63220 83 aaKnown RBP16.45■□□□□ 0.22
CIT-212ENST00000543239 SLC10A7Q0GE19 358 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 PPM1JQ5JR12 505 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 SRLQ86TD4 932 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 RHOT1Q8IXI2 618 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 BBS5Q8N3I7 341 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 MFSD2AQ8NA29 543 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 NSMCE1Q8WV22 266 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 RAPGEF5Q92565 580 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
CIT-212ENST00000543239 ZFR2Q9UPR6 939 aaKnown RBP16.45■□□□□ 0.22
CIT-212ENST00000543239 SNX11Q9Y5W9 270 aa16.45■□□□□ 0.22
CIT-212ENST00000543239 DNAH14Q0VDD8 3507 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 LRRD1A4D1F6 860 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 WNT9AO14904 365 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 AREL1O15033 823 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 INSIG1O15503 277 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 SPOPO43791 374 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 DFNA5O60443 496 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 MAGEC1O60732 1142 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 KCNK5O95279 499 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 PIGNO95427 931 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 WNT1P04628 370 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 HNRNPA2B1P22626 353 aaKnown RBP16.44■□□□□ 0.22
CIT-212ENST00000543239 SERPINA4P29622 427 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 GARSP41250 739 aaKnown RBP16.44■□□□□ 0.22
CIT-212ENST00000543239 NOP2P46087 812 aaKnown RBP16.44■□□□□ 0.22
CIT-212ENST00000543239 RGRP47804 291 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 AP1S1P61966 158 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 GALNT2Q10471 571 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 ZNF235Q14590 738 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms