RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MTTPP55157 894 aa17.39■□□□□ 0.37
SPIDR-227ENST00000541342 GPR17Q13304 367 aa17.39■□□□□ 0.37
SPIDR-227ENST00000541342 EPGNQ6UW88 154 aa17.39■□□□□ 0.37
SPIDR-227ENST00000541342 PDZD4Q76G19 769 aaPredicted RBP17.39■□□□□ 0.37
SPIDR-227ENST00000541342 LRRC43Q8N309 656 aa17.39■□□□□ 0.37
SPIDR-227ENST00000541342 JADE3Q92613 823 aa17.39■□□□□ 0.37
SPIDR-227ENST00000541342 FBXO44Q9H4M3 255 aa17.39■□□□□ 0.37
SPIDR-227ENST00000541342 KCNU1A8MYU2 1149 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 CUL3Q13618 768 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 MANEALQ5VSG8 457 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 RWDD4Q6NW29 188 aaKnown RBP17.38■□□□□ 0.37
SPIDR-227ENST00000541342 ISL2Q96A47 359 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 MOCOSQ96EN8 888 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
SPIDR-227ENST00000541342 PCDHB12Q9Y5F1 795 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 FAM92AA1XBS5 289 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 E9PBE3 544 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 G3V2L1 256 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 KLHL41O60662 606 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 STK10O94804 968 aaKnown RBP17.38■□□□□ 0.37
SPIDR-227ENST00000541342 COX4I1P13073 169 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 ETS2P15036 469 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 TYK2P29597 1187 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 GARSP41250 739 aaKnown RBP17.38■□□□□ 0.37
SPIDR-227ENST00000541342 DCLK2Q8N568 766 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 HDAC11Q96DB2 347 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 ATXN7L3BQ96GX2 97 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 FCRL2Q96LA5 508 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-227ENST00000541342 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 TTPALQ9BTX7 342 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
SPIDR-227ENST00000541342 CPSF2Q9P2I0 782 aaKnown RBP17.38■□□□□ 0.37
SPIDR-227ENST00000541342 KLHL33A6NCF5 533 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 ADAM12O43184 909 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 EFEMP2O95967 443 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 CPA3P15088 417 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 NUMBP49757 651 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 IRF9Q00978 393 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 MED21Q13503 144 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 NAB1Q13506 487 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 PPP2R5DQ14738 602 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 TRIP10Q15642 601 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 RASIP1Q5U651 963 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 UGT2A3Q6UWM9 527 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 DPF3Q92784 378 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 OR52B2Q96RD2 323 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 SEPT5Q99719 369 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 VN1R3Q9BXE9 311 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 PACSIN3Q9UKS6 424 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 NCAM2O15394 837 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 ZBTB17Q13105 803 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 MSANTD2Q6P1R3 559 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 FAM43BQ6ZT52 329 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 CERS2Q96G23 380 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 PCDH10Q9P2E7 1040 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 IGSF9Q9P2J2 1179 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 NYNRINQ9P2P1 1898 aaKnown RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 MOCS2O96007 188 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 PABPC4LP0CB38 370 aaKnown RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 HOXC13P31276 330 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 GP5P40197 560 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 ELAVL2Q12926 359 aaKnown RBP17.37■□□□□ 0.37
SPIDR-227ENST00000541342 DLG2Q15700 870 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 MGAT5BQ3V5L5 792 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 SERPINB11Q96P15 392 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 AGAP2Q99490 1192 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 CDH19Q9H159 772 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 CWH43Q9H720 699 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 HS3ST4Q9Y661 456 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 RPS6KL1Q9Y6S9 549 aa17.37■□□□□ 0.37
SPIDR-227ENST00000541342 TBX18O95935 607 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 SPATA31D3P0C874 917 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 SERPINB6P35237 376 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ABCG1P45844 678 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 DUSP4Q13115 394 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 KLF10Q13118 480 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ARHGAP36Q6ZRI8 547 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 SPATA31D4Q6ZUB0 917 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 PID1Q7Z2X4 250 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 C14orf80Q86SX3 495 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ACVR1CQ8NER5 493 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ZSCAN18Q8TBC5 510 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 SLC39A13Q96H72 371 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 FERMT1Q9BQL6 677 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 NDFIP2Q9NV92 336 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 PCDHGB4Q9UN71 923 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 PCDHGB5Q9Y5G0 923 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CDY1Q9Y6F8 540 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 PARNO95453 639 aaKnown RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 HAPLN1P10915 354 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 YWHAQP27348 245 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CD68P34810 354 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 XIAPP98170 497 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 OGFRL1Q5TC84 451 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 FSTL4Q6MZW2 842 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ANKS3Q6ZW76 656 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CLEC14AQ86T13 490 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ST13P4Q8IZP2 240 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms