RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 COL9A3Q14050 684 aaPredicted RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 CFAP221Q4G0U5 840 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 ZNF789Q5FWF6 425 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 HERC4Q5GLZ8 1057 aaPredicted RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 C6orf136Q5SQH8 315 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 ARHGAP40Q5TG30 622 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 CDKAL1Q5VV42 579 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 AFMIDQ63HM1 303 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 LIPIQ6XZB0 460 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 C1orf186Q6ZWK4 172 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 TAS2R42Q7RTR8 314 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 ATG9AQ7Z3C6 839 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 VASH2Q86V25 355 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 DHX40Q8IX18 779 aaKnown RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 DDIASQ8IXT1 998 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 GUF1Q8N442 669 aaKnown RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 TSPAN14Q8NG11 270 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 SUN3Q8TAQ9 357 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 RAPGEF5Q92565 580 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 NKD2Q969F2 451 aaPredicted RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 SLAMF9Q96A28 289 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 MMABQ96EY8 250 aaPredicted RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 HHIPL1Q96JK4 782 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 HNRNPABQ99729 332 aaKnown RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 TLR10Q9BXR5 811 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 KCNK9Q9NPC2 374 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 MBD1Q9UIS9 605 aaPredicted RBP9.97□□□□□ -0.81
LRP6-205ENST00000540527 ITGA11Q9UKX5 1188 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 SIT1Q9Y3P8 196 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 PCDHB7Q9Y5E2 793 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 NPHP3Q7Z494 1330 aa9.97□□□□□ -0.81
LRP6-205ENST00000540527 TCRBV7S2A1N4TA0A589 114 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 H0YIN7 160 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 M0QYT0 321 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 PPEF2O14830 753 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 EIF3DO15371 548 aaKnown RBP eCLIP9.96□□□□□ -0.82
LRP6-205ENST00000540527 BUB1O43683 1085 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 PRSS23O95084 383 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 KRT6BP04259 564 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 RBL1P28749 1068 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 CORO1AP31146 461 aaKnown RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 TAGLN2P37802 199 aaKnown RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 KRT6CP48668 564 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 VPS41P49754 854 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 SLC20A2Q08357 652 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 DDX39BQ13838 428 aaKnown RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 IQCB1Q15051 598 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 DPYSL2Q16555 572 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 FASTKD1Q53R41 847 aaKnown RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 CLEC17AQ6ZS10 378 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 TRAPPC11Q7Z392 1133 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 SPATA21Q7Z572 469 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 SYVN1Q86TM6 617 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 TIGD4Q8IY51 512 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 LRRC8CQ8TDW0 803 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 PSPC1Q8WXF1 523 aaKnown RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 MISP3Q96FF7 219 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 HES6Q96HZ4 224 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 HIST1H2AAQ96QV6 131 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 MYOCQ99972 504 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 NDC1Q9BTX1 674 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 POLR1EQ9GZS1 481 aaKnown RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 THAP1Q9NVV9 213 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 DTLQ9NZJ0 730 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 IL1RAPL1Q9NZN1 696 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 VPS18Q9P253 973 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 IMPACTQ9P2X3 320 aa9.96□□□□□ -0.82
LRP6-205ENST00000540527 TRPC5Q9UL62 973 aaPredicted RBP9.96□□□□□ -0.82
LRP6-205ENST00000540527 A0A1W2PQ27 194 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 A0A1W2PQ64 194 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 A0A1W2PQC6 194 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 A0A1W2PQD8 194 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 SH3D21A4FU49 640 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 LRRC53A6NM62 1247 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 E9PBE3 544 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 POLR2DO15514 142 aaKnown RBP9.95□□□□□ -0.82
LRP6-205ENST00000540527 SMAD6O43541 496 aaKnown RBP9.95□□□□□ -0.82
LRP6-205ENST00000540527 ZC3H11AO75152 810 aaKnown RBP eCLIP9.95□□□□□ -0.82
LRP6-205ENST00000540527 KLHL18O94889 574 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 HAUS5O94927 633 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 SEC31AO94979 1220 aaKnown RBP9.95□□□□□ -0.82
LRP6-205ENST00000540527 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
LRP6-205ENST00000540527 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
LRP6-205ENST00000540527 RAP2AP10114 183 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 TNFRSF1AP19438 455 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 ITIH1P19827 911 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 ACHEP22303 614 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 CD27P26842 260 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 PTGER3P43115 390 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 METAP1P53582 386 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 MVDP53602 400 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 VCPP55072 806 aaKnown RBP9.95□□□□□ -0.82
LRP6-205ENST00000540527 IL13RA1P78552 427 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 ACY1Q03154 408 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 MVKQ03426 396 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 EGR3Q06889 387 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 RAPSNQ13702 412 aa9.95□□□□□ -0.82
LRP6-205ENST00000540527 EFTUD2Q15029 972 aaKnown RBP eCLIP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms