RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PRNPP04156 253 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 CTAGE8P0CG41 777 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 RGRP47804 291 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 C2orf54Q08AI8 447 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 ZKSCAN8Q15776 578 aaPredicted RBP15.62■□□□□ 0.09
DDB1-216ENST00000539739 ALG1LQ6GMV1 187 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 CTAGE6Q86UF2 777 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 CTAGE4Q8IX94 777 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.62■□□□□ 0.09
DDB1-216ENST00000539739 OR2T3Q8NH03 318 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 LRIG1Q96JA1 1093 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 PPP1R2P1Q96PQ5 205 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 KRT12Q99456 494 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 SLC25A51Q9H1U9 297 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 EPHX3Q9H6B9 360 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 ZDHHC6Q9H6R6 413 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 PAK5Q9P286 719 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 IL36AQ9UHA7 158 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 EVLQ9UI08 416 aaPredicted RBP15.62■□□□□ 0.09
DDB1-216ENST00000539739 MUC22E2RYF6 1773 aaPredicted RBP15.62■□□□□ 0.09
DDB1-216ENST00000539739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 A0A1W2PQF6 199 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 PI15O43692 258 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 SERPINF2P08697 491 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 CR2P20023 1033 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 NRLP54845 237 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 DHX34Q14147 1143 aaKnown RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 PRPSAP1Q14558 356 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 PPP1R7Q15435 360 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 KIAA1211LQ6NV74 962 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 OR6K2Q8NGY2 324 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 TUBGCP5Q96RT8 1024 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 CPEB1Q9BZB8 566 aaKnown RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 GBA3Q9H227 469 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 ATP13A3Q9H7F0 1226 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 PCDH9Q9HC56 1237 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 GOLGA6CA6NDK9 693 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 C1QTNF3-AMACRE9PGA6 284 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 ALDH1A2O94788 518 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 KRT14P02533 472 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 GOLGA6DP0CG33 693 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 NFKB1P19838 968 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 COL9A1P20849 921 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 CD68P34810 354 aaPredicted RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 CCR3P51677 355 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 DR1Q01658 176 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 DSC2Q02487 901 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 BCL2L1Q07817 233 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 MTAPQ13126 283 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 PARP6Q2NL67 630 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 FAM46CQ5VWP2 391 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 NCEH1Q6PIU2 408 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 TMEM92Q6UXU6 159 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 SYDE1Q6ZW31 735 aaPredicted RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 MAATS1Q7Z4T9 603 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 FBXL6Q8N531 539 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 CHST14Q8NCH0 376 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 TMIEQ8NEW7 156 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 GRIN3AQ8TCU5 1115 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 CCHCR1Q8TD31 782 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 SLCO2A1Q92959 643 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 ERLEC1Q96DZ1 483 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 IMP4Q96G21 291 aaKnown RBP15.61■□□□□ 0.09
DDB1-216ENST00000539739 FCRL5Q96RD9 977 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 FAM129BQ96TA1 746 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 OSBPL1AQ9BXW6 950 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 GOLGA6AQ9NYA3 693 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 DLGAP2Q9P1A6 1054 aa15.61■□□□□ 0.09
DDB1-216ENST00000539739 MUC3AQ02505 3323 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 TCRBV21S2A2A0A5A6 115 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 TTC24A2A3L6 582 aaPredicted RBP15.6■□□□□ 0.09
DDB1-216ENST00000539739 LEFTY1O75610 366 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 ANXA9O76027 345 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 IL1BP01584 269 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 ETS1P14921 441 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 CA4P22748 312 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 SERPINA4P29622 427 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 FDFT1P37268 417 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 CD86P42081 329 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 CXCL12P48061 93 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 NIPAL4Q0D2K0 466 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 ARSIQ5FYB1 569 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 ZNF776Q68DI1 518 aaPredicted RBP15.6■□□□□ 0.09
DDB1-216ENST00000539739 MAMSTRQ6ZN01 415 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 TMPRSS6Q8IU80 811 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 MMAAQ8IVH4 418 aaKnown RBP15.6■□□□□ 0.09
DDB1-216ENST00000539739 PAF1Q8N7H5 531 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 TSTD1Q8NFU3 115 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 ARRDC2Q8TBH0 407 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 CARD6Q9BX69 1037 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 RSPH9Q9H1X1 276 aaPredicted RBP15.6■□□□□ 0.09
DDB1-216ENST00000539739 L2HGDHQ9H9P8 463 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 POLR3BQ9NW08 1133 aaPredicted RBP15.6■□□□□ 0.09
DDB1-216ENST00000539739 SPATA6Q9NWH7 488 aaPredicted RBP15.6■□□□□ 0.09
DDB1-216ENST00000539739 FAM153AQ9UHL3 310 aa15.6■□□□□ 0.09
DDB1-216ENST00000539739 PPM1HQ9ULR3 514 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms