RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 FAM129BQ96TA1 746 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 NCAPGQ9BPX3 1015 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 CNPY3Q9BT09 278 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 CAAP1Q9H8G2 361 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 KCND1Q9NSA2 647 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 TMEM59LQ9UK28 342 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 SATB2Q9UPW6 733 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 NAALADL1Q9UQQ1 740 aa12.77□□□□□ -0.37
CLSTN3-208ENST00000538933 PMS2P1A4D2B8 440 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 M0QYT0 321 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 BUB1BO60566 1050 aaPredicted RBP12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 PALMO75781 387 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 RNASEH2AO75792 299 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 ATP5BP06576 529 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 MYF5P13349 255 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 TNNT1P13805 278 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 DGKAP23743 735 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC8A1P32418 973 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 CD70P32970 193 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC1A1P43005 524 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SGSHP51688 502 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 ADPRHP54922 357 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 PPP2CBP62714 309 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 PPP2CAP67775 309 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 DEUP1Q05D60 604 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 NME3Q13232 169 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 HADHQ16836 314 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 HNRNPA1L2Q32P51 320 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC45A4Q5BKX6 768 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 PEX26Q7Z412 305 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 TTC17Q96AE7 1141 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 CFAP57Q96MR6 1250 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 TRIM7Q9C029 511 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SALL4Q9UJQ4 1053 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 AMFRQ9UKV5 643 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 CAPN6Q9Y6Q1 641 aa12.76□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC12A8A0AV02 714 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 GRID2IPA4D2P6 1211 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 ESPNB1AK53 854 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 PROSCO94903 275 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 F9P00740 461 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 GP1BAP07359 652 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 GOT1P17174 413 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 MAN1A1P33908 653 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 GJC1P36383 396 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 PTPN9P43378 593 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 DAB2P98082 770 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 OVGP1Q12889 678 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 C15orf59Q2T9L4 293 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC25A52Q3SY17 297 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 SYPL2Q5VXT5 272 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 C11orf63Q6NUN7 778 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 BHLHA9Q7RTU4 235 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 MMAAQ8IVH4 418 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 FAM172AQ8WUF8 416 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 FAM131CQ96AQ9 280 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 PLD4Q96BZ4 506 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 TMA16Q96EY4 203 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 CCDC97Q96F63 343 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 C16orf45Q96MC5 204 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 SERPINB11Q96P15 392 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 TBCBQ99426 244 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 OMDQ99983 421 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 TPX2Q9ULW0 747 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
CLSTN3-208ENST00000538933 KIF2AO00139 706 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 PRPSAP2O60256 369 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 TRUB2O95900 331 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 CR2P20023 1033 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 COMTP21964 271 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 HARS2P49590 506 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 OGDHQ02218 1023 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 CCDC14Q49A88 953 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 C3orf38Q5JPI3 329 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 ADGRF1Q5T601 910 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 STRADAQ7RTN6 431 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 CLEC14AQ86T13 490 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 SLC35F6Q8N357 371 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 OR14C36Q8NHC7 312 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 DQX1Q8TE96 717 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 ATXN7L3BQ96GX2 97 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 APOLD1Q96LR9 279 aa12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 CCNL2Q96S94 520 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-208ENST00000538933 NPY6RQ99463 290 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms