RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
SCARB1-205ENST00000538291 ADAMTSL2Q86TH1 951 aa16.96■□□□□ 0.31
SCARB1-205ENST00000538291 MMADHCQ9H3L0 296 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-205ENST00000538291 MST1RQ04912 1400 aa16.96■□□□□ 0.3
SCARB1-205ENST00000538291 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.3
SCARB1-205ENST00000538291 NEURL4Q96JN8 1562 aa16.96■□□□□ 0.3
SCARB1-205ENST00000538291 GSAPA4D1B5 854 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 H2AFXP16104 143 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 GABRR2P28476 465 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 SMARCB1Q12824 385 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 UXS1Q8NBZ7 420 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 TTPALQ9BTX7 342 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 LYVE1Q9Y5Y7 322 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ERBB2P04626 1255 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 TNFSF9P41273 254 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 SULT2A1Q06520 285 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 RBM23Q86U06 439 aaKnown RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 PRDM12Q9H4Q4 367 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 CNGB3Q9NQW8 809 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 TEX28O15482 410 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 LAG3P18627 525 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 SDHAF4Q5VUM1 108 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF276Q8N554 614 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 KCNK4Q9NYG8 393 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ANAPC2Q9UJX6 822 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ANGPT4Q9Y264 503 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 BCL10O95999 233 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 FLT3LGP49771 235 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 AP5B1Q2VPB7 878 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 XKR6Q5GH73 641 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 KLHL35Q6PF15 583 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 VWDEQ8N2E2 1590 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 PGM2Q96G03 612 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 KIAA1522Q9P206 1035 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 TRIM43BA6NCK2 446 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 TFEBP19484 476 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 OR1D2P34982 312 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 NAGLUP54802 743 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 IFI35P80217 286 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF57Q68EA5 555 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 MON1AQ86VX9 555 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 PURBQ96QR8 312 aaKnown RBP16.95■□□□□ 0.3
SCARB1-205ENST00000538291 FERD3LQ96RJ6 166 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
SCARB1-205ENST00000538291 HNF4AP41235 474 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ABRQ12979 859 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 MTAPQ13126 283 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 FAM35AQ86V20 835 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 DENND6AQ8IWF6 608 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 FAM71AQ8IYT1 594 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 GINS4Q9BRT9 223 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ABCG4Q9H172 646 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 POLR1BQ9H9Y6 1135 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 CORO2BQ9UQ03 480 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 KCNE2Q9Y6J6 123 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ITSN1Q15811 1721 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 GLUD2P49448 558 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 CASP5P51878 434 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 TUSC3Q13454 348 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 MEA1Q16626 185 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 PPP1R15BQ5SWA1 713 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 SPPL2BQ8TCT7 592 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 COPS8Q99627 209 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 BRD9Q9H8M2 597 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 RPS6KA6Q9UK32 745 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 RPTORQ8N122 1335 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 SLC28A1O00337 649 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 MYBL2P10244 700 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 MATKP42679 507 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 CRADDP78560 199 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 SLC34A1Q06495 639 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 CDK18Q07002 472 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 TRIM25Q14258 630 aaKnown RBP16.94■□□□□ 0.3
SCARB1-205ENST00000538291 GPAT3Q53EU6 434 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 BRMS1LQ5PSV4 323 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 NEK5Q6P3R8 708 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF671Q8TAW3 534 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 C6orf62Q9GZU0 229 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ARMCX1Q9P291 453 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 FFAR3O14843 346 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 GPR42O15529 346 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 LIASO43766 372 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 PEX11AO75192 247 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 ELFN1P0C7U0 828 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 RTP1P59025 263 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 LPCAT2Q7L5N7 544 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 PHF13Q86YI8 300 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-205ENST00000538291 HAS1Q92839 578 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 DUSP16Q9BY84 665 aa16.94■□□□□ 0.3
SCARB1-205ENST00000538291 REXO4Q9GZR2 422 aaKnown RBP16.94■□□□□ 0.3
SCARB1-205ENST00000538291 RACGAP1Q9H0H5 632 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms