RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 AGGF1Q8N302 714 aaeCLIP5.41□□□□□ -1.54
LRP6-203ENST00000538239 TNFRSF25Q93038 417 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 RPL10LQ96L21 214 aaKnown RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 CPXM1Q96SM3 734 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 OSBPL1AQ9BXW6 950 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ARHGAP39Q9C0H5 1083 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CIDEBQ9UHD4 219 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ADAMTSL3P82987 1691 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CYP1A1P04798 512 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 CFIP05156 583 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ZNF23P17027 643 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 DGKEP52429 567 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 C2orf27AQ580R0 203 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 LRRC73Q5JTD7 316 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ZNF621Q6ZSS3 439 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 COMMD2Q86X83 199 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TCP10LQ8TDR4 215 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TRPC4APQ8TEL6 797 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SELENOMQ8WWX9 145 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SHC3Q92529 594 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ACAT2Q9BWD1 397 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SEZ6LQ9BYH1 1024 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 AGO3Q9H9G7 860 aaKnown RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 EFCAB1Q9HAE3 211 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 KLHL28Q9NXS3 571 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SIRPGQ9P1W8 387 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ARHGAP28Q9P2N2 729 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 MORF4L1Q9UBU8 362 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ABHD14A-ACY1A0A1B0GW23 586 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 ACSL4O60488 711 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 LTA4HP09960 611 aaKnown RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 TSPAN8P19075 237 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CDK18Q07002 472 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PEX6Q13608 980 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 TRIP10Q15642 601 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 DEPDC1Q5TB30 811 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 RHBDF2Q6PJF5 856 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 DEFB119Q8N690 84 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 OR4L1Q8NH43 312 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 HMGB4Q8WW32 186 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 KREMEN1Q96MU8 473 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CCT7Q99832 543 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 FUCA2Q9BTY2 467 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 SCN3BQ9NY72 215 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 L1RE1Q9UN81 338 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CHURC1-FNTBB4DL54 471 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 SLCO1B7G3V0H7 640 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 SLC31A1O15431 190 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CD3EAPO15446 510 aaKnown RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 GMFGO60234 142 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 EPORP19235 508 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 KELP23276 732 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 MARCKSL1P49006 195 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 DHPSP49366 369 aaPredicted RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 JAG1P78504 1218 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 DMTNQ08495 405 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 GRM3Q14832 879 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 UNC5AQ6ZN44 842 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PLD3Q8IV08 490 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CDK20Q8IZL9 346 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 HDDC3Q8N4P3 179 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 SPPL2AQ8TCT8 520 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 ZNF384Q8TF68 577 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 ANKRD49Q8WVL7 239 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CNBD2Q96M20 576 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 TLR9Q9NR96 1032 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PHPT1Q9NRX4 125 aaPredicted RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.4□□□□□ -1.54
LRP6-203ENST00000538239 SLC12A4Q9UP95 1085 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 STXBP5LQ9Y2K9 1186 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 RGPD5Q99666 1765 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 WDR47O94967 919 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 WARSP23381 471 aaKnown RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 NOS3P29474 1203 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 CHRNB3Q05901 458 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 VAC14Q08AM6 782 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 TRAF2Q12933 501 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 ZNF792Q3KQV3 632 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PTPN20Q4JDL3 420 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 TIGD5Q53EQ6 642 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 LCLAT1Q6UWP7 414 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 HDAC7Q8WUI4 952 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 EMID1Q96A84 441 aaPredicted RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 NACC2Q96BF6 587 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 HMCESQ96FZ2 354 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 APOPT1Q96IL0 206 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PLIN4Q96Q06 1357 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 MAF1Q9H063 256 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PCDH12Q9NPG4 1184 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 ABCB8Q9NUT2 735 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 HAO1Q9UJM8 370 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 NRXN3Q9Y4C0 1643 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 RAI2Q9Y5P3 530 aa5.4□□□□□ -1.54
LRP6-203ENST00000538239 PHRF1Q9P1Y6 1649 aaKnown RBP5.4□□□□□ -1.54
LRP6-203ENST00000538239 A0A0U1RQJ8 604 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 C9IYK1 514 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 DNM1LO00429 736 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms