RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 CD38P28907 300 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 SLC1A1P43005 524 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 BNC1Q01954 994 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 LBRQ14739 615 aaKnown RBP23.54■■□□□ 1.36
CHFR-215ENST00000537551 GRM3Q14832 879 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 KIF19Q2TAC6 998 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 ODF2Q5BJF6 829 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 NAPEPLDQ6IQ20 393 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 TTC7BQ86TV6 843 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 HORMAD1Q86X24 394 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 TSEN2Q8NCE0 465 aaKnown RBP23.54■■□□□ 1.36
CHFR-215ENST00000537551 PCDH19Q8TAB3 1148 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 NSMCE1Q8WV22 266 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 KLK6Q92876 244 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 RAB7BQ96AH8 199 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 FEM1CQ96JP0 617 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 ZNF599Q96NL3 588 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 CPEB1Q9BZB8 566 aaKnown RBP23.54■■□□□ 1.36
CHFR-215ENST00000537551 GAREM1Q9H706 876 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 DNAAF2Q9NVR5 837 aaKnown RBP23.54■■□□□ 1.36
CHFR-215ENST00000537551 DMTF1Q9Y222 760 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 FADS3Q9Y5Q0 445 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 SNX11Q9Y5W9 270 aa23.54■■□□□ 1.36
CHFR-215ENST00000537551 CACNA1EQ15878 2313 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 SLC31A1O15431 190 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 SPOPO43791 374 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 NDUFA10O95299 355 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 KDELR1P24390 212 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 CDC25BP30305 580 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 RENBPP51606 427 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 STAT4Q14765 748 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 HLA-BQ31612 363 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 PPM1JQ5JR12 505 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 TMCO4Q5TGY1 634 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 SRLQ86TD4 932 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 RAPGEF5Q92565 580 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 IMPACTQ9P2X3 320 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 SEPT3Q9UH03 358 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 TFR2Q9UP52 801 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 HYOU1Q9Y4L1 999 aa23.53■■□□□ 1.36
CHFR-215ENST00000537551 LRRD1A4D1F6 860 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 WNT9AO14904 365 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 VILLO15195 856 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 AP1G1O43747 822 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 PIGNO95427 931 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 FECHP22830 423 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 XPAP23025 273 aaPredicted RBP23.52■■□□□ 1.36
CHFR-215ENST00000537551 SLC10A7Q0GE19 358 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 ZNF235Q14590 738 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 CFAP58Q5T655 872 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 RHOT1Q8IXI2 618 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 BBS5Q8N3I7 341 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 VOPP1Q96AW1 172 aa23.52■■□□□ 1.36
CHFR-215ENST00000537551 BAG1Q99933 345 aaPredicted RBP23.52■■□□□ 1.36
CHFR-215ENST00000537551 GOLGA6L6A8MZA4 724 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 PRAMEF26H0Y7S4 382 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 MFSD11O43934 449 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 MAFKO60675 156 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 WNT1P04628 370 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 PRLRP16471 622 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 COMTP21964 271 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 ABL2P42684 1182 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 RGRP47804 291 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 CSNK1DP48730 415 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 SCNN1BP51168 640 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 RPS21P63220 83 aaKnown RBP23.51■■□□□ 1.35
CHFR-215ENST00000537551 NSUN2Q08J23 767 aaKnown RBP eCLIP23.51■■□□□ 1.35
CHFR-215ENST00000537551 PAFAH1B3Q15102 231 aaKnown RBP23.51■■□□□ 1.35
CHFR-215ENST00000537551 SEL1L3Q68CR1 1132 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 NCBP2-AS2Q69YL0 99 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 KIAA1161Q6NSJ0 714 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 LRRC49Q8IUZ0 686 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 PAF1Q8N7H5 531 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 MYOCQ99972 504 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 MAK16Q9BXY0 300 aaKnown RBP23.51■■□□□ 1.35
CHFR-215ENST00000537551 SUV39H2Q9H5I1 410 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 IL21RQ9HBE5 538 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 DKK3Q9UBP4 350 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 ZFR2Q9UPR6 939 aaKnown RBP23.51■■□□□ 1.35
CHFR-215ENST00000537551 PLXNA2O75051 1894 aa23.51■■□□□ 1.35
CHFR-215ENST00000537551 KCNK3O14649 394 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 TSPAN6O43657 245 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 KCNK5O95279 499 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 KRT1P04264 644 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 CTSKP43235 329 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 NOVA1P51513 510 aaKnown RBP23.5■■□□□ 1.35
CHFR-215ENST00000537551 HADHBP55084 474 aaKnown RBP23.5■■□□□ 1.35
CHFR-215ENST00000537551 SLC14A1Q13336 389 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 ZNF284Q2VY69 593 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 LRRC73Q5JTD7 316 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 LRRC38Q5VT99 294 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 RAD9BQ6WBX8 426 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.5■■□□□ 1.35
CHFR-215ENST00000537551 FAF2Q96CS3 445 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 ZNF641Q96N77 438 aaPredicted RBP23.5■■□□□ 1.35
CHFR-215ENST00000537551 RNF157Q96PX1 679 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 PSKH2Q96QS6 385 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 TUBGCP5Q96RT8 1024 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 SLC32A1Q9H598 525 aa23.5■■□□□ 1.35
CHFR-215ENST00000537551 ATP13A3Q9H7F0 1226 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms