RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	RNPS1	Q15287	305 aa	Known RBP	5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	KIAA1614	Q5VZ46	1190 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	CES5A	Q6NT32	575 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	NCEH1	Q6PIU2	408 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	TSSK4	Q6SA08	328 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	BRINP3	Q76B58	766 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	CCDC105	Q8IYK2	499 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	CADM3	Q8N126	398 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	SRBD1	Q8N5C6	995 aa	Known RBP	5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	WDTC1	Q8N5D0	677 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	SLC16A11	Q8NCK7	471 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	TMEM170A	Q8WVE7	144 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	POMGNT1	Q8WZA1	660 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	ARHGEF2	Q92974	986 aa	Known RBP	5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	EME1	Q96AY2	570 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	WDFY2	Q96P53	400 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	SIN3A	Q96ST3	1273 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	SMARCAD1	Q9H4L7	1026 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	SH2D4A	Q9H788	454 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	WDR6	Q9NNW5	1121 aa	Known RBP	5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	NCKIPSD	Q9NZQ3	722 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	HAO1	Q9UJM8	370 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	KAT6A	Q92794	2004 aa		5.68	□□□□□ -1.5
PRKDC-208	ENST00000536710	KIR2DS5	A0A0G2JLQ3	304 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	hCG_1807616	A0A1W2PRN6	198 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	C17orf102	A2RUQ5	167 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710		B4DLN1	442 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	KIR2DS3	K7RE56	304 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	PPP6C	O00743	305 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	VILL	O15195	856 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	ATP2C2	O75185	946 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	PCNA	P12004	261 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	UNG	P13051	313 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	ATP5F1	P24539	256 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CERS1	P27544	350 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	PTGER1	P34995	402 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	GPR12	P47775	334 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CLCN5	P51795	746 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	NLRP5	P59047	1200 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CEBPZ	Q03701	1054 aa	Known RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CHAF1B	Q13112	559 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	MFSD4B	Q5TF39	518 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	TXNDC8	Q6A555	127 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	LRRC8E	Q6NSJ5	796 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	KLHL35	Q6PF15	583 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	ENOSF1	Q7L5Y1	443 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	SERPINA11	Q86U17	422 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	TMC8	Q8IU68	726 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	C17orf53	Q8N3J3	647 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	HORMAD2	Q8N7B1	307 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	OR4N2	Q8NGD1	307 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	FAM120B	Q96EK7	910 aa	Known RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CALML4	Q96GE6	196 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CMTM3	Q96MX0	182 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	LHPP	Q9H008	270 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	POLR1B	Q9H9Y6	1135 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	SCPEP1	Q9HB40	452 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	PNRC2	Q9NPJ4	139 aa	Known RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	RRP7BP	Q9NSQ0	103 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	POLG2	Q9UHN1	485 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	SLCO3A1	Q9UIG8	710 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	AGO2	Q9UKV8	859 aa	Known RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	CARD8	Q9Y2G2	431 aa		5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.67	□□□□□ -1.5
PRKDC-208	ENST00000536710	RUSC2	Q8N2Y8	1516 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	SMIM35	A0A1B0GVV1	85 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	CBY3	A6NI87	242 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	USP17L23	D6RBM5	183 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	TCERG1	O14776	1098 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	TMCC2	O75069	709 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	STARD3NL	O95772	234 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	POR	P16435	677 aa	Predicted RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	RAD52	P43351	418 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	GABRB2	P47870	512 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	CLDN2	P57739	230 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	ID2	Q02363	134 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	CRYM	Q14894	314 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	SMTNL2	Q2TAL5	461 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	C6orf10	Q5SRN2	563 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	TMEM154	Q6P9G4	183 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	KDELC2	Q7Z4H8	507 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	DHX40	Q8IX18	779 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	FAM217A	Q8IXS0	508 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	TAGAP	Q8N103	731 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	ZCCHC9	Q8N567	271 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	NSUN4	Q96CB9	384 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	RNF183	Q96D59	192 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	ERP27	Q96DN0	273 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	PABPC5	Q96DU9	382 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	SIGLEC11	Q96RL6	698 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	QTRT1	Q9BXR0	403 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	MAK16	Q9BXY0	300 aa	Known RBP	5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	KIF9	Q9HAQ2	790 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	SPAG4	Q9NPE6	437 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	THSD1	Q9NS62	852 aa		5.66	□□□□□ -1.5
PRKDC-208	ENST00000536710	SLC6A13	Q9NSD5	602 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms