RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ZFXP17010 805 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCNCP24863 283 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ABL2P42684 1182 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MMP13P45452 471 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CSNK1DP48730 415 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RWDD2BP57060 319 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 COPS2P61201 443 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAXP61244 160 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZBTB17Q13105 803 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF211Q13398 564 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IHHQ14623 411 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ODF2Q5BJF6 829 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF805Q5CZA5 627 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LRRC73Q5JTD7 316 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PEAR1Q5VY43 1037 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KIAA0895LQ68EN5 471 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TCEAL6Q6IPX3 200 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ERN2Q76MJ5 926 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CYP2U1Q7Z449 544 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SRLQ86TD4 932 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZSWIM9Q86XI8 627 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OR2T34Q8NGX1 318 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PIGKQ92643 395 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FOXJ1Q92949 421 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TCEAL3Q969E4 200 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FATE1Q969F0 183 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 BIRC7Q96CA5 298 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LRIG1Q96JA1 1093 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KLHL32Q96NJ5 620 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HEMGNQ9BXL5 484 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAK16Q9BXY0 300 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HDAC8Q9BY41 377 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PCED1AQ9H1Q7 454 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 EBF2Q9HAK2 575 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SEPT3Q9UH03 358 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GGT7Q9UJ14 662 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PILRBQ9UKJ0 227 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PCDHGA5Q9Y5G8 931 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TRPM6Q9BX84 2022 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TMEM131Q92545 1883 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 C16orf96A6NNT2 1141 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MEI4A8MW99 385 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MIF4GDA9UHW6 222 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 KCNK1O00180 336 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TRAFD1O14545 582 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SLC7A4O43246 635 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NRDCO43847 1150 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PTMAP06454 111 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CCNB1P14635 433 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MX2P20592 715 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TGM2P21980 687 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PTPN7P35236 360 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SCNN1BP51168 640 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RENBPP51606 427 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NEK3P51956 506 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SFSWAPQ12872 951 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HNRNPDQ14103 355 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TFDP2Q14188 446 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZNF235Q14590 738 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SF3A2Q15428 464 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MARC1Q5VT66 337 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ALG1LQ6GMV1 187 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TIGD7Q6NT04 549 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CAMK1DQ8IU85 385 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SYT12Q8IV01 421 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 REXO1L1PQ8IX06 675 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CCDC13Q8IYE1 715 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CCNYQ8ND76 341 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 C1orf216Q8TAB5 229 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 DNASE2BQ8WZ79 361 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ANP32BQ92688 251 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HAUS1Q96CS2 278 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PPP1R16AQ96I34 528 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TUBGCP5Q96RT8 1024 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HINFPQ9BQA5 517 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 OSBPL1AQ9BXW6 950 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NT5MQ9NPB1 228 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 DYRK4Q9NR20 520 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RXFP3Q9NSD7 469 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SEMA4GQ9NTN9 838 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 EIF2B4Q9UI10 523 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ITM2BQ9Y287 266 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 EFR3BQ9Y2G0 817 aa11.45□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3DA0A087WVF3 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3IA0A087WXS9 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3EA0A087X179 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3KA0A087X1G2 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TSPAN11A1L157 253 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3FA6NER0 549 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 LRRC72A6NJI9 287 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3LB9A6J9 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 LATO43561 262 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 LRP3O75074 770 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FSBPO95073 299 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HLA-DQB2P05538 268 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms