RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SCLYQ96I15 445 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 TBC1D14Q9P2M4 693 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC27A6Q9Y2P4 619 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 RWDD3Q9Y3V2 267 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 PTPN4P29074 926 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 BIKQ13323 160 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 FAM187BQ17R55 369 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 BHLHB9Q6PI77 547 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 IL27RAQ6UWB1 636 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 PAGE2Q7Z2X7 111 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 SPATA6LQ8N4H0 392 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 UTP15Q8TED0 518 aaKnown RBP14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 CFAP97Q9P2B7 532 aa14.92□□□□□ -0.02
PCDHA9-202ENST00000532602 DNTTP04053 509 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 NQO1P15559 274 aaKnown RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 CCR4P51679 360 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 NOMO3P69849 1222 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 KLHL35Q6PF15 583 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC40A1Q9NP59 571 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ADAM28Q9UKQ2 775 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 DUSP12Q9UNI6 340 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 CACNB4O00305 520 aaPredicted RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 COX7A2P14406 83 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 WASP42768 502 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 FRG1Q14331 258 aaKnown RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 TMC3Q7Z5M5 1100 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 DTNBP1Q96EV8 351 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 KLHL5Q96PQ7 755 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 SEMA4BQ9NPR2 832 aaPredicted RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 STMN3Q9NZ72 180 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 LZTS1Q9Y250 596 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ARL5CA6NH57 179 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 DUSP11O75319 330 aaKnown RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ERN1O75460 977 aaKnown RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 EPN2O95208 641 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 LYPLA2O95372 231 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 UBTFL6P0CB48 400 aaPredicted RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 VAV1P15498 845 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ZNF24P17028 368 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ZACNQ401N2 412 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 TSHZ1Q6ZSZ6 1077 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 CEP68Q76N32 757 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 DHFR2Q86XF0 187 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 FLCNQ8NFG4 579 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 MTERF3Q96E29 417 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 SEMA3CQ99985 751 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ZNF232Q9UNY5 417 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 MAGEA13PA6NCF6 341 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 IFNA16P05015 189 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 UMPSP11172 480 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 PRMT2P55345 433 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 AGMOQ6ZNB7 445 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 MTMR14Q8NCE2 650 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 HEXDCQ8WVB3 486 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 RMND5BQ96G75 393 aaPredicted RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 TMEM216Q9P0N5 145 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ATP6V1B1P15313 513 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ZNF621Q6ZSS3 439 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 IFNL1Q8IU54 200 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 DEFB107AQ8IZN7 70 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 ARIH1Q9Y4X5 557 aaPredicted RBP14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 PCDHA11Q9Y5I1 949 aa14.91□□□□□ -0.02
PCDHA9-202ENST00000532602 LIASO43766 372 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC35G4P0C7Q5 338 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 TAF10Q12962 218 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 ALG11Q2TAA5 492 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 PLA2G4EQ3MJ16 856 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 TYW3Q6IPR3 259 aaKnown RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 TMPRSS6Q8IU80 811 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 SETD9Q8NE22 299 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 ALG9Q9H6U8 611 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 KIAA1522Q9P206 1035 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 INPP4BO15327 924 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 ATG7O95352 703 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 HNRNPCP07910 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 RPL17P18621 184 aaKnown RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 IRX1P78414 480 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC24A5Q71RS6 500 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 BEND7Q8N7W2 519 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 WDR36Q8NI36 951 aaKnown RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 RNFT2Q96EX2 444 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 RNF157Q96PX1 679 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 BRD9Q9H8M2 597 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 ZNF711Q9Y462 761 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 CLUHO75153 1309 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 RPA3P35244 121 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 MATKP42679 507 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 PHF13Q86YI8 300 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 RERGQ96A58 199 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 LPIN3Q9BQK8 851 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 NEK6Q9HC98 313 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 CACNG4Q9UBN1 327 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 MAFBQ9Y5Q3 323 aaPredicted RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 C1orf232A0A0U1RR37 186 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 GPR25O00155 361 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms