RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
CTSC-206ENST00000529974 AP4E1Q9UPM8 1137 aa11.32□□□□□ -0.6
CTSC-206ENST00000529974 PCDHGA1Q9Y5H4 931 aa11.32□□□□□ -0.6
CTSC-206ENST00000529974 LRP4O75096 1905 aa11.32□□□□□ -0.6
CTSC-206ENST00000529974 POM121BA6NF01 834 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 A6NNZ2 444 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 TRIM38O00635 465 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 BUB1O43683 1085 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 RFPL3O75679 317 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 LDOC1O95751 146 aaPredicted RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 GIMD1P0DJR0 217 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 PSMA2P25787 234 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 HTR7P34969 479 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 PBX1P40424 430 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 YBEYP58557 167 aaPredicted RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 TPI1P60174 286 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 SNRPD1P62314 119 aaKnown RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 RPS21P63220 83 aaKnown RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 NR1I3Q14994 352 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 MYLK3Q32MK0 819 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 INO80DQ53TQ3 878 aaPredicted RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 TPRG1LQ5T0D9 272 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 FBXL19Q6PCT2 694 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 PTAR1Q7Z6K3 402 aaPredicted RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 GALNT15Q8N3T1 639 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 SLC25A45Q8N413 288 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 RYBPQ8N488 228 aaPredicted RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 RAB7BQ96AH8 199 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 EXOC2Q96KP1 924 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 BMFQ96LC9 184 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 KLHL32Q96NJ5 620 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 KCTD15Q96SI1 283 aaPredicted RBP11.31□□□□□ -0.6
CTSC-206ENST00000529974 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 OSBPL1AQ9BXW6 950 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 SLC17A9Q9BYT1 436 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 CATSPERBQ9H7T0 1116 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 CBX8Q9HC52 389 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 UCKL1Q9NWZ5 548 aa11.31□□□□□ -0.6
CTSC-206ENST00000529974 SYCE3A1L190 88 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 IGLON5A6NGN9 336 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 INSIG1O15503 277 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 TSPAN6O43657 245 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 SIGLEC6O43699 453 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 LRCH4O75427 683 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 PIAS2O75928 621 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 POP4O95707 220 aaKnown RBP11.3□□□□□ -0.6
CTSC-206ENST00000529974 IGSF6O95976 241 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
CTSC-206ENST00000529974 GZMAP12544 262 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 SKILP12757 684 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 DGKAP23743 735 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 RHOAP61586 193 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 KLHL30Q0D2K2 578 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 FZD2Q14332 565 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 KLHL40Q2TBA0 621 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 FILIP1LQ4L180 1135 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 FIGNQ5HY92 759 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 AFMIDQ63HM1 303 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 GDPD4Q6W3E5 623 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 Q6ZSR6 202 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 LUZP1Q86V48 1076 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 ZSCAN30Q86W11 494 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 NPWQ8N729 165 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 ZNF653Q96CK0 615 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
CTSC-206ENST00000529974 EDEM3Q9BZQ6 932 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 DHX35Q9H5Z1 703 aaKnown RBP11.3□□□□□ -0.6
CTSC-206ENST00000529974 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 CNOT8Q9UFF9 292 aaKnown RBP11.3□□□□□ -0.6
CTSC-206ENST00000529974 MFHAS1Q9Y4C4 1052 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 ATMQ13315 3056 aa11.3□□□□□ -0.6
CTSC-206ENST00000529974 TSPAN11A1L157 253 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 EIF3CLB5ME19 914 aaKnown RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 J3KR12 359 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 EEF2KO00418 725 aaKnown RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 PRAMEF11O60813 436 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 PIGNO95427 931 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 TCF4P15884 667 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 ITIH2P19823 946 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 MIPP30301 263 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 IGFALSP35858 605 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 RGRP47804 291 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 NDST2P52849 883 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 DPYSQ14117 519 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 CYTH1Q15438 398 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 ZNF542PQ5EBM4 170 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 RFX8Q6ZV50 586 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 DENND6BQ8NEG7 585 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 OR4C6Q8NH72 309 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms