RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 C10orf142B7Z368 130 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 LATO43561 262 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 AP1G1O43747 822 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 MFSD11O43934 449 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 MX2P20592 715 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 GKP32189 559 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 VAV2P52735 878 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 NAP1L1P55209 391 aaKnown RBP14.59□□□□□ -0.07
NXF1-204ENST00000527064 TAS2R38P59533 333 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 PPP2CBP62714 309 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 RACK1P63244 317 aaKnown RBP14.59□□□□□ -0.07
NXF1-204ENST00000527064 PPP2CAP67775 309 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 NSUN2Q08J23 767 aaKnown RBP eCLIP14.59□□□□□ -0.07
NXF1-204ENST00000527064 GALNT2Q10471 571 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 LBRQ14739 615 aaKnown RBP14.59□□□□□ -0.07
NXF1-204ENST00000527064 SLC45A4Q5BKX6 768 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 CFAP58Q5T655 872 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 KIAA1161Q6NSJ0 714 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 TIGD7Q6NT04 549 aaPredicted RBP14.59□□□□□ -0.07
NXF1-204ENST00000527064 ADAT2Q7Z6V5 191 aaKnown RBP14.59□□□□□ -0.07
NXF1-204ENST00000527064 TMEM139Q8IV31 216 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 HCAR2Q8TDS4 363 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 RAPGEF5Q92565 580 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 KLHL32Q96NJ5 620 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 PSKH2Q96QS6 385 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 GTPBP2Q9BX10 602 aaKnown RBP14.59□□□□□ -0.07
NXF1-204ENST00000527064 ATP13A3Q9H7F0 1226 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 DKK3Q9UBP4 350 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 DMTF1Q9Y222 760 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 ALG6Q9Y672 507 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 SDK1Q7Z5N4 2213 aa14.59□□□□□ -0.07
NXF1-204ENST00000527064 MAFKO60675 156 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 RNGTTO60942 597 aaKnown RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 PCDH8O95206 1070 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 CER1O95813 267 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 TNNT1P13805 278 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 ZFXP17010 805 aaPredicted RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 SERPINA4P29622 427 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 GARSP41250 739 aaKnown RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 SUOXP51687 545 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 AP1S1P61966 158 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 GRIK2Q13002 908 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 IFI16Q16666 785 aaKnown RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 NAPEPLDQ6IQ20 393 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 DAAM2Q86T65 1068 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 SRLQ86TD4 932 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 TP53INP2Q8IXH6 220 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 TSEN2Q8NCE0 465 aaKnown RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 ACRBPQ8NEB7 543 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 CCDC112Q8NEF3 446 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 SERAC1Q96JX3 654 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 ZNF641Q96N77 438 aaPredicted RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 RNF157Q96PX1 679 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 ORAI3Q9BRQ5 295 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 AASDHPPTQ9NRN7 309 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 REXO2Q9Y3B8 237 aaKnown RBP14.58□□□□□ -0.08
NXF1-204ENST00000527064 HYOU1Q9Y4L1 999 aa14.58□□□□□ -0.08
NXF1-204ENST00000527064 PCDH15Q96QU1 1955 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 A0A1W2PQU0 124 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
NXF1-204ENST00000527064 C4orf47A7E2U8 309 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 RNF103O00237 685 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 NEMP1O14524 444 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 APOL1O14791 398 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 PJA2O43164 708 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 TSPAN6O43657 245 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 OPHN1O60890 802 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 XPAP23025 273 aaPredicted RBP14.57□□□□□ -0.08
NXF1-204ENST00000527064 MAT2AP31153 395 aaKnown RBP14.57□□□□□ -0.08
NXF1-204ENST00000527064 MMP13P45452 471 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 C21orf59P57076 290 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 RPS21P63220 83 aaKnown RBP14.57□□□□□ -0.08
NXF1-204ENST00000527064 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 BRAT1Q6PJG6 821 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 HORMAD1Q86X24 394 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 MINDY1Q8N5J2 469 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 PQLC3Q8N755 202 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 TPCN2Q8NHX9 752 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 FATE1Q969F0 183 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 FEM1CQ96JP0 617 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 SLC6A18Q96N87 628 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 SUV39H2Q9H5I1 410 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 FSCN3Q9NQT6 498 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 TFR2Q9UP52 801 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 FADS3Q9Y5Q0 445 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 NUMA1Q14980 2115 aa14.57□□□□□ -0.08
NXF1-204ENST00000527064 LAMA1P25391 3075 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.56□□□□□ -0.08
NXF1-204ENST00000527064 A0A1B0GVT2 93 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 TSPAN11A1L157 253 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 RCCD1A6NED2 376 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 PRAMEF26H0Y7S4 382 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 CDX4O14627 284 aaPredicted RBP14.56□□□□□ -0.08
NXF1-204ENST00000527064 INSIG1O15503 277 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 PIGNO95427 931 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 PEX11BO96011 259 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 CCNCP24863 283 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 CD38P28907 300 aa14.56□□□□□ -0.08
NXF1-204ENST00000527064 CSNK1EP49674 416 aaKnown RBP14.56□□□□□ -0.08
NXF1-204ENST00000527064 SCNN1BP51168 640 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms