RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 HLA-BQ31612 363 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 ANKRD20A8PQ5CZ79 823 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 PPM1JQ5JR12 505 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 NAPEPLDQ6IQ20 393 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 TMTC1Q8IUR5 882 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 MAP7D3Q8IWC1 876 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 RAPGEF5Q92565 580 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 ANP32EQ9BTT0 268 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 CINPQ9BW66 212 aaPredicted RBP20.92■□□□□ 0.94
TRIM35-203ENST00000521253 CPEB1Q9BZB8 566 aaKnown RBP20.92■□□□□ 0.94
TRIM35-203ENST00000521253 GAREM1Q9H706 876 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 IL21RQ9HBE5 538 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 TFR2Q9UP52 801 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 ZFR2Q9UPR6 939 aaKnown RBP20.92■□□□□ 0.94
TRIM35-203ENST00000521253 DMTF1Q9Y222 760 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 SNX11Q9Y5W9 270 aa20.92■□□□□ 0.94
TRIM35-203ENST00000521253 A0A1W2PR77 199 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 VILLO15195 856 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 AP1G1O43747 822 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 PIGNO95427 931 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 PEX11BO96011 259 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 WNT1P04628 370 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 CD38P28907 300 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 ABL2P42684 1182 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 SLC10A7Q0GE19 358 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 ZNF284Q2VY69 593 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 SETMARQ53H47 684 aaPredicted RBP20.91■□□□□ 0.94
TRIM35-203ENST00000521253 ZFYVE27Q5T4F4 411 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 SEL1L3Q68CR1 1132 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 NCBP2-AS2Q69YL0 99 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 ASCC3Q8N3C0 2202 aaKnown RBP20.91■□□□□ 0.94
TRIM35-203ENST00000521253 ATPAF2Q8N5M1 289 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 KLK6Q92876 244 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 FAF2Q96CS3 445 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 ZNF599Q96NL3 588 aa20.91■□□□□ 0.94
TRIM35-203ENST00000521253 FNDC3AQ9Y2H6 1198 aaKnown RBP20.91■□□□□ 0.94
TRIM35-203ENST00000521253 EPN1Q9Y6I3 576 aaPredicted RBP20.91■□□□□ 0.94
TRIM35-203ENST00000521253 MUSKO15146 869 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 MFSD11O43934 449 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 MAFKO60675 156 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 NDUFA10O95299 355 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 CER1O95813 267 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 PRLRP16471 622 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 KCNA4P22459 653 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 CDC25BP30305 580 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 SLC1A1P43005 524 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 CTSKP43235 329 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 NOP2P46087 812 aaKnown RBP20.9■□□□□ 0.94
TRIM35-203ENST00000521253 C21orf59P57076 290 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 LBRQ14739 615 aaKnown RBP20.9■□□□□ 0.94
TRIM35-203ENST00000521253 PAFAH1B3Q15102 231 aaKnown RBP20.9■□□□□ 0.94
TRIM35-203ENST00000521253 TMEM259Q4ZIN3 620 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 TMCO4Q5TGY1 634 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 RAB7BQ96AH8 199 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 DKK3Q9UBP4 350 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 SEPT3Q9UH03 358 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 ITM2BQ9Y287 266 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 HYOU1Q9Y4L1 999 aa20.9■□□□□ 0.94
TRIM35-203ENST00000521253 MED19A0JLT2 244 aaPredicted RBP20.89■□□□□ 0.93
TRIM35-203ENST00000521253 LRRD1A4D1F6 860 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 KCNK3O14649 394 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 SLC31A1O15431 190 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 SPINT1O43278 529 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 BUB1BO60566 1050 aaPredicted RBP20.89■□□□□ 0.93
TRIM35-203ENST00000521253 KCNK5O95279 499 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 CD59P13987 128 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 CSRP1P21291 193 aaKnown RBP20.89■□□□□ 0.93
TRIM35-203ENST00000521253 COMTP21964 271 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 KDELR1P24390 212 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 CSNK1DP48730 415 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 HADHBP55084 474 aaKnown RBP20.89■□□□□ 0.93
TRIM35-203ENST00000521253 GRM3Q14832 879 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 LRRC73Q5JTD7 316 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 LRRC38Q5VT99 294 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 KIAA1161Q6NSJ0 714 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 RAD9BQ6WBX8 426 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 SRLQ86TD4 932 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 TTC7BQ86TV6 843 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 PQLC3Q8N755 202 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 SKA1Q96BD8 255 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 FEM1CQ96JP0 617 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 PSKH2Q96QS6 385 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 SUV39H2Q9H5I1 410 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 LUC7LQ9NQ29 371 aaKnown RBP20.89■□□□□ 0.93
TRIM35-203ENST00000521253 GGT7Q9UJ14 662 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 CA5BQ9Y2D0 317 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 PLXNA2O75051 1894 aa20.89■□□□□ 0.93
TRIM35-203ENST00000521253 UPK3BL1B0FP48 263 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 UPK3BL2E5RIL1 263 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 PRAMEF26H0Y7S4 382 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 AREL1O15033 823 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 TIMP2P16035 220 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 NOVA1P51513 510 aaKnown RBP20.88■□□□□ 0.93
TRIM35-203ENST00000521253 RPS21P63220 83 aaKnown RBP20.88■□□□□ 0.93
TRIM35-203ENST00000521253 NSUN2Q08J23 767 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRIM35-203ENST00000521253 GALNT2Q10471 571 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 SLC14A1Q13336 389 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 SLC45A4Q5BKX6 768 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 PSAPL1Q6NUJ1 521 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 PIP4P1Q86T03 277 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms