RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 AOC1P19801 751 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 CD86P42081 329 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 SKOR1P84550 965 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 CRY1Q16526 586 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 KIAA1211LQ6NV74 962 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 DSG4Q86SJ6 1040 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 KLHDC8BQ8IXV7 354 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 SPEM1Q8N4L4 309 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 NOA1Q8NC60 698 aaKnown RBP18.01■□□□□ 0.47
SDC2-205ENST00000520233 TMIEQ8NEW7 156 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 OR6K2Q8NGY2 324 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 OR2T3Q8NH03 318 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 VOPP1Q96AW1 172 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 NSMCE3Q96MG7 304 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 RBM15Q96T37 977 aaKnown RBP eCLIP18.01■□□□□ 0.47
SDC2-205ENST00000520233 GORASP1Q9BQQ3 440 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 RSPH9Q9H1X1 276 aaPredicted RBP18.01■□□□□ 0.47
SDC2-205ENST00000520233 ZDHHC6Q9H6R6 413 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 VPS45Q9NRW7 570 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 DLGAP2Q9P1A6 1054 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 IL36AQ9UHA7 158 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 WASF2Q9Y6W5 498 aa18.01■□□□□ 0.47
SDC2-205ENST00000520233 ANXA9O76027 345 aa18■□□□□ 0.47
SDC2-205ENST00000520233 PRNPP04156 253 aa18■□□□□ 0.47
SDC2-205ENST00000520233 DCNP07585 359 aaKnown RBP18■□□□□ 0.47
SDC2-205ENST00000520233 COL9A1P20849 921 aa18■□□□□ 0.47
SDC2-205ENST00000520233 GKP32189 559 aa18■□□□□ 0.47
SDC2-205ENST00000520233 CLCN5P51795 746 aa18■□□□□ 0.47
SDC2-205ENST00000520233 GEMP55040 296 aa18■□□□□ 0.47
SDC2-205ENST00000520233 BCL2L1Q07817 233 aa18■□□□□ 0.47
SDC2-205ENST00000520233 GPS1Q13098 491 aa18■□□□□ 0.47
SDC2-205ENST00000520233 MPP3Q13368 585 aa18■□□□□ 0.47
SDC2-205ENST00000520233 IHHQ14623 411 aa18■□□□□ 0.47
SDC2-205ENST00000520233 GLE1Q53GS7 698 aaKnown RBP18■□□□□ 0.47
SDC2-205ENST00000520233 TMEM92Q6UXU6 159 aa18■□□□□ 0.47
SDC2-205ENST00000520233 SPATA22Q8NHS9 363 aa18■□□□□ 0.47
SDC2-205ENST00000520233 OXNAD1Q96HP4 312 aaPredicted RBP18■□□□□ 0.47
SDC2-205ENST00000520233 TRIM51Q9BSJ1 452 aa18■□□□□ 0.47
SDC2-205ENST00000520233 LRRC1Q9BTT6 524 aa18■□□□□ 0.47
SDC2-205ENST00000520233 OSBPL1AQ9BXW6 950 aa18■□□□□ 0.47
SDC2-205ENST00000520233 ATP13A3Q9H7F0 1226 aa18■□□□□ 0.47
SDC2-205ENST00000520233 ETNK1Q9HBU6 452 aa18■□□□□ 0.47
SDC2-205ENST00000520233 RAB6BQ9NRW1 208 aa18■□□□□ 0.47
SDC2-205ENST00000520233 ASIC3Q9UHC3 531 aa18■□□□□ 0.47
SDC2-205ENST00000520233 FAM153AQ9UHL3 310 aa18■□□□□ 0.47
SDC2-205ENST00000520233 PPM1HQ9ULR3 514 aa18■□□□□ 0.47
SDC2-205ENST00000520233 AAR2Q9Y312 384 aaKnown RBP18■□□□□ 0.47
SDC2-205ENST00000520233 GOLGA6CA6NDK9 693 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 GOLGA6BA6NDN3 693 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 F5H423 210 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 TNFRSF10AO00220 468 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 PSMD3O43242 534 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 PI15O43692 258 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 RNASEH1O60930 286 aaKnown RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 SOCS5O75159 536 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 LEFTY1O75610 366 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 MT-CYBP00156 380 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 CTSLP07711 333 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 GOLGA6DP0CG33 693 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 SERPINA4P29622 427 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 VPS41P49754 854 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 DGKEP52429 567 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 COPAP53621 1224 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 SEMA5AQ13591 1074 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 KCTD19Q17RG1 926 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 ARSIQ5FYB1 569 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 GDPD4Q6W3E5 623 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 MAMSTRQ6ZN01 415 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 BMP8AQ7Z5Y6 402 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 TAB3Q8N5C8 712 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 GRIN3AQ8TCU5 1115 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 LRRC45Q96CN5 670 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 ZNF641Q96N77 438 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 MLPHQ9BV36 600 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 POLMQ9NP87 494 aaPredicted RBP17.99■□□□□ 0.47
SDC2-205ENST00000520233 GOLGA6AQ9NYA3 693 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 UBP1Q9NZI7 540 aa17.99■□□□□ 0.47
SDC2-205ENST00000520233 C1QTNF3-AMACRE9PGA6 284 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 TRAFD1O14545 582 aaPredicted RBP17.98■□□□□ 0.47
SDC2-205ENST00000520233 SLU7O95391 586 aaKnown RBP17.98■□□□□ 0.47
SDC2-205ENST00000520233 PIGNO95427 931 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 C7P10643 843 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 CA4P22748 312 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 ADCY8P40145 1251 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 BASP1P80723 227 aaKnown RBP17.98■□□□□ 0.47
SDC2-205ENST00000520233 MRPS25P82663 173 aaKnown RBP17.98■□□□□ 0.47
SDC2-205ENST00000520233 MTAPQ13126 283 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 FAXCQ5TGI0 409 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 FAM46CQ5VWP2 391 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 ZNF776Q68DI1 518 aaPredicted RBP17.98■□□□□ 0.47
SDC2-205ENST00000520233 KDELC1Q6UW63 502 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 CAMK1DQ8IU85 385 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 LRRN4CLQ8ND94 238 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 PIP4K2CQ8TBX8 421 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 PBXIP1Q96AQ6 731 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 ERLEC1Q96DZ1 483 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 ERP44Q9BS26 406 aa17.98■□□□□ 0.47
SDC2-205ENST00000520233 COL25A1Q9BXS0 654 aaPredicted RBP17.98■□□□□ 0.47
SDC2-205ENST00000520233 RAB17Q9H0T7 212 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms