RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 QPCTQ16769 361 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 DUSP12Q9UNI6 340 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC12A4Q9UP95 1085 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 NDUFAF1Q9Y375 327 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 PCDHGC5Q9Y5F6 944 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 MICAL2O94851 1124 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 PRIM2P49643 509 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 DRG2P55039 364 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 CDH17Q12864 832 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 GRIK5Q16478 980 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 SERPINA13PQ6UXR4 307 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 KYAT3Q6YP21 454 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 CXorf40AQ8TE69 158 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 EDEM1Q92611 657 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 FAM120BQ96EK7 910 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 BRD9Q9H8M2 597 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NFATC1O95644 943 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF682O95780 498 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 S100A6P06703 90 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 FGRP09769 529 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 SOX10P56693 466 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ORC1Q13415 861 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 TSNQ15631 228 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 WSCD1Q658N2 575 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 OTOAQ7RTW8 1153 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZBTB8BQ8NAP8 495 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 POP1Q99575 1024 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 GPR20Q99678 358 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 TMED5Q9Y3A6 229 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 TRIM64CA6NLI5 447 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ERI2A8K979 691 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NADKO95544 446 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 PFKMP08237 780 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 CYP2F1P24903 491 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NPY2RP49146 381 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC12A3P55017 1021 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 MGAT5Q09328 741 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 C5orf22Q49AR2 442 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 RUNDC3AQ59EK9 446 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 SPOCD1Q6ZMY3 1216 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 DEFB106AQ8N104 65 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF655Q8N720 491 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 PDPRQ8NCN5 879 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ADCY4Q8NFM4 1077 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 PIWIL2Q8TC59 973 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 SMG7Q92540 1137 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 CENPIQ92674 756 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ULBP1Q9BZM6 244 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF624Q9P2J8 865 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ANAPC2Q9UJX6 822 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NFKBIEO00221 500 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 EOMESO95936 686 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 EPB42P16452 691 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 STAT5AP42229 794 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZSWIM7Q19AV6 140 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NT5DC3Q86UY8 548 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 PQLC1Q8N2U9 271 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 UTP15Q8TED0 518 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 POLR1EQ9GZS1 481 aaKnown RBP12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 RGS18Q9NS28 235 aa12.37□□□□□ -0.43
PCDHGA6-201ENST00000517434 LOC100506127A0A0U1RQW1 187 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 SHBGP04278 402 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 PTGS2P35354 604 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 GP5P40197 560 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 NME5P56597 212 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 FPGSQ05932 587 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 CAPSQ13938 189 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 ACOX1Q15067 660 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 MTSS1LQ765P7 747 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 LPCAT1Q8NF37 534 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 RASSF5Q8WWW0 418 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 MLPHQ9BV36 600 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 EPB41L1Q9H4G0 881 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 VPS45Q9NRW7 570 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 SETMARQ53H47 684 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 NEK10Q6ZWH5 1172 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 DRAXINQ8NBI3 349 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 RNF112Q9ULX5 631 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 LRRC10BA6NIK2 292 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 DNM1LO00429 736 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 KPNA5O15131 536 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 RARAP10276 462 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms