RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TFB2MQ9H5Q4 396 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PLEKHA5Q9HAU0 1116 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 PATZ1Q9HBE1 687 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 MAGEE1Q9HCI5 957 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 NOX4Q9NPH5 578 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 CHPF2Q9P2E5 772 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 LIMA1Q9UHB6 759 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 EXO1Q9UQ84 846 aaKnown RBP-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 IPPQ9Y573 584 aa-0.67□□□□□ -2.52
RNU6-542P-201ENST00000516405 CCDC163A0A0D9SF12 145 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 A6NL46 340 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 SERPINE3A8MV23 424 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 PANO1I0J062 215 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 SRGAP2O75044 1071 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLCO2B1O94956 709 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 CLDN7O95471 211 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 MAP4K4O95819 1239 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 PRB1P04280 392 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC3A2P08195 630 aaKnown RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 FGRP09769 529 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 MYF5P13349 255 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 GYS1P13807 737 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 ITGA2P17301 1181 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 SMARCA1P28370 1054 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 AXLP30530 894 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 HALP42357 657 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 WNT3P56703 355 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 ADORA2A-AS1P86434 159 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 OASLQ15646 514 aaKnown RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 FNDC3BQ53EP0 1204 aaKnown RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 KRTCAP3Q53RY4 240 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 TECRLQ5HYJ1 363 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 C10orf76Q5T2E6 689 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 AAGABQ6PD74 315 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 IL27RAQ6UWB1 636 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 GLDNQ6ZMI3 551 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 KCTD20Q7Z5Y7 419 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 C11orf96Q7Z7L8 435 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 MAML2Q8IZL2 1156 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 FAM185AQ8N0U4 392 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 LSMEM2Q8N112 164 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 MRAPQ8TCY5 172 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 GIPC2Q8TF65 315 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 STARD4Q96DR4 205 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 FAM122AQ96E09 287 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 FEZ1Q99689 392 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 PANK2Q9BZ23 570 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF71Q9NQZ8 489 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 MAN1C1Q9NR34 630 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 NUDT4Q9NZJ9 180 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 ADAM22Q9P0K1 906 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 STEAP1Q9UHE8 339 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 ARHGAP21Q5T5U3 1957 aa-0.68□□□□□ -2.52
RNU6-542P-201ENST00000516405 SVILO95425 2214 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 A0A087WWV3 80 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 A0A1W2PQ72 361 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 FAM168BA1KXE4 195 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 GOLGA8AA7E2F4 631 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 MSI1O43347 362 aaKnown RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 VNN2O95498 520 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 NADKO95544 446 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 FTH1P19P0C7X4 201 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 TMEM225BP0DP42 221 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 UNGP13051 313 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 PIK3R1P27986 724 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 GPR3P46089 330 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC11A2P49281 568 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 PGDP52209 483 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 IL2P60568 153 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SNRPD1P62314 119 aaKnown RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 KIF23Q02241 960 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 KCNA1Q09470 495 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 MTAPQ13126 283 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 GALNT3Q14435 633 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 PCBP1Q15365 356 aaKnown RBP eCLIP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 KIAA1644Q3SXP7 199 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SIRPB2Q5JXA9 342 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 C14orf80Q86SX3 495 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 C11orf74Q86VG3 221 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 P3H2Q8IVL5 708 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 AADATQ8N5Z0 425 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 MIPOL1Q8TD10 442 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC20A1Q8WUM9 679 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 APPBP2Q92624 585 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 TOMM40LQ969M1 308 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 HDAC10Q969S8 669 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 DHX58Q96C10 678 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 KLF6Q99612 283 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 BUD13Q9BRD0 619 aaKnown RBP eCLIP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF577Q9BSK1 485 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC39A8Q9C0K1 460 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 DNAJC28Q9NX36 388 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 ADPRHL2Q9NX46 363 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC9A2Q9UBY0 812 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 MUTYHQ9UIF7 546 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLCO3A1Q9UIG8 710 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC27A6Q9Y2P4 619 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 RAP2CQ9Y3L5 183 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 PCDHA3Q9Y5H8 950 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms