RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 RPS6KL1Q9Y6S9 549 aa12.76□□□□□ -0.37
LYSMD3-204ENST00000509384 FAM237BA0A1B0GVD1 139 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 USP1O94782 785 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 ADH1CP00326 375 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 CYP17A1P05093 508 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 ADH5P11766 374 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 PABPC1P11940 636 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 CR2P20023 1033 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 GCAP28676 217 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 MSH2P43246 934 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 MAGOHP61326 146 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 CDK18Q07002 472 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 IHHQ14623 411 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 RASA2Q15283 850 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 SLC1A5Q15758 541 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 EML3Q32P44 896 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 FUT11Q495W5 492 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 SPANXN3Q5MJ09 141 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 CTAGE3PQ8IX95 158 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 PPHLN1Q8NEY8 458 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 ZNF669Q96BR6 464 aaPredicted RBP12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 RIPOR3Q96MK2 946 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 ARNT2Q9HBZ2 717 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 LHX3Q9UBR4 397 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 TBK1Q9UHD2 729 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 SOX13Q9UN79 622 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 IKBKGQ9Y6K9 419 aa12.75□□□□□ -0.37
LYSMD3-204ENST00000509384 DOCK6Q96HP0 2047 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 TMEM265A0A087WTH1 108 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 LOC285095A0A1B0GVY8 99 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 HOXC11O43248 304 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 TBX10O75333 385 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 PIAS1O75925 651 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 NFATC1O95644 943 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 MT-CO1P00395 513 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 INHBAP08476 426 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 HLA-DPA1P20036 260 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 NR1D1P20393 614 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 FCARP24071 287 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 HPDP32754 393 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 NSUN2Q08J23 767 aaKnown RBP eCLIP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 SEPT6Q14141 434 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 DMC1Q14565 340 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 POU6F1Q14863 301 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 PCID2Q5JVF3 399 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 TRMT10BQ6PF06 316 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 CES3Q6UWW8 571 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 KDM7AQ6ZMT4 941 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 CYS1Q717R9 158 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 TMEM135Q86UB9 458 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 SLC44A1Q8WWI5 657 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 CDKL2Q92772 493 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 TTC17Q96AE7 1141 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 DHRS4Q9BTZ2 278 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 KIFC1Q9BW19 673 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 CAPS2Q9BXY5 557 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 S1PR5Q9H228 398 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 ZFP14Q9HCL3 533 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 THG1LQ9NWX6 298 aaKnown RBP12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 EURLQ9NYK6 297 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 MOCS1Q9NZB8 636 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 SLC25A13Q9UJS0 675 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 TCAF1Q9Y4C2 921 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 MTCH2Q9Y6C9 303 aa12.74□□□□□ -0.37
LYSMD3-204ENST00000509384 K7ERQ8 282 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 ALDH1A2O94788 518 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 EPOP01588 193 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 C1QAP02745 245 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 FGF1P05230 155 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 ARSAP15289 507 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 CA4P22748 312 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 FRG1Q14331 258 aaKnown RBP12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 PDGFRLQ15198 375 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 CTC1Q2NKJ3 1217 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 TNFAIP8L3Q5GJ75 292 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 RALGPS1Q5JS13 557 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 SIRPB2Q5JXA9 342 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 ARMC3Q5W041 872 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 TANGO2Q6ICL3 276 aa12.73□□□□□ -0.37
LYSMD3-204ENST00000509384 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms