RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 DENND1BQ6P3S1 775 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 TCP11L2Q8N4U5 519 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 MCPH1Q8NEM0 835 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 DNAAF1Q8NEP3 725 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 LILRB1Q8NHL6 650 aaPredicted RBP4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 HSPH1Q92598 858 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 LMAN2LQ9H0V9 348 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 DDX31Q9H8H2 851 aaKnown RBP4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 PTPRHQ9HD43 1115 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 ITM2CQ9NQX7 267 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 RRP7AQ9Y3A4 280 aaKnown RBP4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 hCG_1642624A0A1W2PR95 340 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 KIF1CO43896 1103 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 CAMTA2O94983 1202 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 AFPP02771 609 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 TNNT1P13805 278 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 TTKP33981 857 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 CXCR3P49682 368 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 DDR1Q08345 913 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 SLC39A14Q15043 492 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 PDCD2Q16342 344 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 NCAPH2Q6IBW4 605 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 HERC6Q8IVU3 1022 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 SPPL3Q8TCT6 385 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 STN1Q9H668 368 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 RETREG1Q9H6L5 497 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 GAREM1Q9H706 876 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 TXLNGQ9NUQ3 528 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 ICAM5Q9UMF0 924 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 CNPY2Q9Y2B0 182 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 SLC45A1Q9Y2W3 748 aa4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 MORC2Q9Y6X9 1032 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-225ENST00000508476 NBNO60934 754 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 CENPAP49450 140 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 MYBPHQ13203 477 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 SF3B4Q15427 424 aaKnown RBP eCLIP4.79□□□□□ -1.649e-7■■■■■ 33.6
UBE2D3-225ENST00000508476 KIF19Q2TAC6 998 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 DENND6AQ8IWF6 608 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 MB21D2Q8IYB1 491 aaPredicted RBP4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 PGBD5Q8N414 524 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 TBC1D20Q96BZ9 403 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 RNF183Q96D59 192 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 COG8Q96MW5 612 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 VPS33BQ9H267 617 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 SLC32A1Q9H598 525 aa4.79□□□□□ -1.64
UBE2D3-225ENST00000508476 ADGRF5Q8IZF2 1346 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 FAM90A7PA6NKC0 464 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 FAM90A22PA8MWA6 464 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 FAM90A12PA8MX19 464 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 FAM90A23PA8MXZ1 464 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 PEX12O00623 359 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 CH25HO95992 272 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 DHRS4L1P0CG22 281 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 RPL3P39023 403 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 GRK6P43250 576 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 DHX34Q14147 1143 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 ADCK5Q3MIX3 580 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 ZNF718Q3SXZ3 478 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 SETMARQ53H47 684 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 ZNF329Q86UD4 541 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 C2CD5Q86YS7 1000 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 LURAP1LQ8IV03 231 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 ZNF114Q8NC26 417 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 ARRDC2Q8TBH0 407 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 GDPD5Q8WTR4 605 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 MROH8Q9H579 483 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 ENTPD7Q9NQZ7 604 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 OR6C3Q9NZP0 311 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 MDFICQ9P1T7 246 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 MALT1Q9UDY8 824 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 KCNG2Q9UJ96 466 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 GDAQ9Y2T3 454 aa4.78□□□□□ -1.64
UBE2D3-225ENST00000508476 LOC102724159A0A0B4J2E5 919 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 A0A0U1RQJ8 604 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 DENND3A2RUS2 1198 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 VWA3AA6NCI4 1184 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 SLC16A5O15375 505 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 KLK10O43240 276 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 LDB3O75112 727 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 VNN2O95498 520 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 LDHAP00338 332 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 WEE2P0C1S8 567 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 SSTR2P30874 369 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 LIFRP42702 1097 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 PWP2Q15269 919 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 PLEKHO1Q53GL0 409 aaPredicted RBP4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 XKR9Q5GH70 373 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 EFHC1Q5JVL4 640 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 C9orf50Q5SZB4 431 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 RHBDF2Q6PJF5 856 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 USP43Q70EL4 1123 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 MOB3CQ70IA8 216 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 AADATQ8N5Z0 425 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 RFWD2Q8NHY2 731 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 RAB40AQ8WXH6 277 aa4.77□□□□□ -1.65
UBE2D3-225ENST00000508476 TRIB2Q92519 343 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms