RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TECTAO75443 2155 aa4.82□□□□□ -1.64
NUP54-206ENST00000508465 NOTCH4Q99466 2003 aa4.82□□□□□ -1.64
NUP54-206ENST00000508465 ANK1P16157 1881 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 UBE4BO95155 1302 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 PIPSLA2A3N6 862 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 PRR5-ARHGAP8B1AHC4 643 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ZNF197O14709 1029 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 GABRDO14764 452 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 OPHN1O60890 802 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 AKAP3O75969 853 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SMC2O95347 1197 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 HLA-DRAP01903 254 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 MYL1P05976 194 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 DCNP07585 359 aaKnown RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 GAAP10253 952 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ATF6P18850 670 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 BDNFP23560 247 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 PAX3P23760 479 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 NR2F2P24468 414 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 GABRR2P28476 465 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 AVPR2P30518 371 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CASRP41180 1078 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 GCLMP48507 274 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 LHX1P48742 406 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 TUFMP49411 452 aaKnown RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 VAMP7P51809 220 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CACNA2D1P54289 1103 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 TNNC1P63316 161 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 MYL7Q01449 175 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 TSPY1Q01534 308 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 PPP3CAQ08209 521 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 PLD1Q13393 1074 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 KCNB1Q14721 858 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 TAF12Q16514 161 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CAMK4Q16566 473 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SLC44A4Q53GD3 710 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 MDH1BQ5I0G3 518 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ZNF362Q5T0B9 420 aaPredicted RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 GPR158Q5T848 1215 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ABHD17BQ5VST6 288 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 KLHL10Q6JEL2 608 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 RTL10Q7L3V2 364 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ACOT1Q86TX2 421 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 TMC8Q8IU68 726 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SUGP1Q8IWZ8 645 aaKnown RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 C12orf56Q8IXR9 622 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 FAM186BQ8IYM0 893 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 UNC5BQ8IZJ1 945 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 GUF1Q8N442 669 aaKnown RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 TMEM105Q8N8V8 129 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SEMA4DQ92854 862 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SMARCE1Q969G3 411 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 RSPRY1Q96DX4 576 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ZNF560Q96MR9 790 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CYP2S1Q96SQ9 504 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 PKMYT1Q99640 499 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ACBD6Q9BR61 282 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 B3GNT5Q9BYG0 378 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CPEB1Q9BZB8 566 aaKnown RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 SDCBP2Q9H190 292 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SMYD3Q9H7B4 428 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 ASAH2Q9NR71 780 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 GDE1Q9NZC3 331 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CHMP5Q9NZZ3 219 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 SAMD15Q9P1V8 674 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 CGNQ9P2M7 1197 aaKnown RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 MAN1B1Q9UKM7 699 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 MAFFQ9ULX9 164 aa4.81□□□□□ -1.64
NUP54-206ENST00000508465 MTF2Q9Y483 593 aaPredicted RBP4.81□□□□□ -1.64
NUP54-206ENST00000508465 PDCD11Q14690 1871 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 TRIM49BA6NDI0 452 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SLC38A8A6NNN8 435 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 HEPACAM2A8MVW5 462 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 A8MXQ7 604 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 CETN3O15182 167 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 KINO60870 393 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 KIF20AO95235 890 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 POU2F2P09086 479 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 KRT13P13646 458 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 HMGA1P17096 107 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 WARSP23381 471 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 FCARP24071 287 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 PTX3P26022 381 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 PCSK1P29120 753 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 GDI1P31150 447 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 PSMC2P35998 433 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 ANP32AP39687 249 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 GZMKP49863 264 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 PTTG1IPP53801 180 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 STX17P56962 302 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 MXRA7P84157 204 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SGSM1Q2NKQ1 1148 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 BEAN1Q3B7T3 259 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZACNQ401N2 412 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZCWPW2Q504Y3 356 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZNF658Q5TYW1 1059 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 TXNDC8Q6A555 127 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZCCHC8Q6NZY4 707 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 FAM171BQ6P995 826 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 VITQ6UXI7 678 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms