RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 GAREM2Q75VX8 874 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 CEP97Q8IW35 865 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 OR13J1Q8NGT2 312 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 CPSF2Q9P2I0 782 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 PSMD3O43242 534 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 TGM5O43548 720 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 HAUS5O94927 633 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 CBX6O95503 412 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 DLDP09622 509 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 FGF3P11487 239 aaPredicted RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 LAG3P18627 525 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 ELF1P32519 619 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 GLRBP48167 497 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 MAPKAPK2P49137 400 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 GTF2A1P52655 376 aaPredicted RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 NAB1Q13506 487 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 C5orf22Q49AR2 442 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 RBM20Q5T481 1227 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 MTDHQ86UE4 582 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 NDNQ99608 321 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 SMG9Q9H0W8 520 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 ECT2Q9H8V3 914 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 FNIP2Q9P278 1114 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 ARL5AQ9Y689 179 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 USH1CQ9Y6N9 552 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 CEP290O15078 2479 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 CBX4O00257 560 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 GREM1O60565 184 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 LILRB3O75022 631 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 GLRA3O75311 464 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 ZNF189O75820 626 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 F11P03951 625 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 MZF1P28698 734 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 SERPINH1P50454 418 aaKnown RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 OCRLQ01968 901 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 BNIP1Q12981 228 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 ZNF235Q14590 738 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 MBLAC2Q68D91 279 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 PDPK2PQ6A1A2 396 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 CXorf57Q6NSI4 855 aaKnown RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 FBXO46Q6PJ61 603 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 CNSTQ6PJW8 725 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 KLHL23Q8NBE8 558 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 TMEM237Q96Q45 408 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 TMEM120AQ9BXJ8 343 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 NOD2Q9HC29 1040 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 PLK2Q9NYY3 685 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 H0YHG0 523 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 TK2O00142 265 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 CD160O95971 181 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 PRSS56P0CW18 603 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 TARSP26639 723 aaKnown RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 HNRNPH1P31943 449 aaKnown RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 YBEYP58557 167 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 TMCO4Q5TGY1 634 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 FAM219BQ5XKK7 198 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 POTEHQ6S545 545 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 PTAR1Q7Z6K3 402 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 BLOC1S5Q8TDH9 187 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 SLC22A17Q8WUG5 538 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 ISL2Q96A47 359 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 TADA1Q96BN2 335 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 ARMC5Q96C12 935 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 MARCH4Q9P2E8 410 aaPredicted RBP12.32□□□□□ -0.44
LIN54-206ENST00000506560 CLEC4EQ9ULY5 219 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 ANKRD36A6QL64 1941 aa12.32□□□□□ -0.44
LIN54-206ENST00000506560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 KIAA0355O15063 1070 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 MYL2P10916 166 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SERPINB3P29508 390 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 CCR10P46092 362 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SERPINB8P50452 374 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SCNN1BP51168 640 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 KPNA1P52294 538 aaPredicted RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 CDH4P55283 916 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 FRG1Q14331 258 aaKnown RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 ADGRF1Q5T601 910 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 RNF219Q5W0B1 726 aaPredicted RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 ZNF449Q6P9G9 518 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 KLHDC10Q6PID8 442 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 NAPRTQ6XQN6 538 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 TCEAL8Q8IYN2 117 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 ACMSDQ8TDX5 336 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 KCTD4Q8WVF5 259 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 OVCA2Q8WZ82 227 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 GPR22Q99680 433 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms