RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ZNF516Q92618 1163 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TNIP3Q96KP6 325 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 YME1L1Q96TA2 773 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 KRT12Q99456 494 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TMEM175Q9BSA9 504 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 MBD2Q9UBB5 411 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 DIMT1Q9UNQ2 313 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 INPP5FQ9Y2H2 1132 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 PCDHA11Q9Y5I1 949 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 DUSP10Q9Y6W6 482 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 KCNJ18B7U540 433 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 NUAK1O60285 661 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 POMCP01189 267 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 C4BPAP04003 597 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 KRT10P13645 584 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 NR4A2P43354 598 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 HSPA13P48723 471 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 ARHGDIAP52565 204 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 IFI35P80217 286 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 BTKQ06187 659 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 PPP3CAQ08209 521 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TRPC3Q13507 836 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 THOC5Q13769 683 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 KCNJ12Q14500 433 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 MMEL1Q495T6 779 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TCP11X2Q5H9J9 407 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 C6orf10Q5SRN2 563 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 GTF2IRD2BQ6EKJ0 949 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 RAPH1Q70E73 1250 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 GTF2IRD2Q86UP8 949 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 ZNF280BQ86YH2 543 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 AHI1Q8N157 1196 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 MINDY2Q8NBR6 621 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 OR5B17Q8NGF7 314 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TRUB1Q8WWH5 349 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 CLP1Q92989 425 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TRIM63Q969Q1 353 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 MARC2Q969Z3 335 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 BTBD9Q96Q07 612 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 BTBD10Q9BSF8 475 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 NEUROG2Q9H2A3 272 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TIGARQ9NQ88 270 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 STRIP2Q9ULQ0 834 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 RPH3AQ9Y2J0 694 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 PCDHGA10Q9Y5H3 936 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 LCHNA4D1U4 455 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 GRXCR1A8MXD5 290 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 H0Y858 1186 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TMEM189-UBE2V1I3L0A0 370 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 AREL1O15033 823 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 RAD51BO15315 384 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 DENRO43583 198 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TLL1O43897 1013 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 CBX6O95503 412 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 NPPAP01160 153 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 NUDT17P0C025 328 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 DLATP10515 647 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 SOX5P35711 763 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 MAGEA11P43364 429 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 SMAD3P84022 425 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 CENPCQ03188 943 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 RAD51Q06609 339 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 ACAP2Q15057 778 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 DUOXA2Q1HG44 320 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 LRIT3Q3SXY7 679 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 ZACNQ401N2 412 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TMPRSS9Q7Z410 1059 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TSPYL5Q86VY4 417 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 HID1Q8IV36 788 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 CLIP4Q8N3C7 705 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 FAM109AQ8N4B1 249 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 C1orf127Q8N9H9 656 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 BEST2Q8NFU1 509 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TBC1D15Q8TC07 691 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 SLC2A14Q8TDB8 520 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 LPGAT1Q92604 370 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 HDAC2Q92769 488 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 FATE1Q969F0 183 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 C18orf25Q96B23 403 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 POP1Q99575 1024 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TXLNGYQ9BZA5 131 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 TMEM8AQ9HCN3 771 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 GIMAP4Q9NUV9 329 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 CEP72Q9P209 647 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 KIF17Q9P2E2 1029 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 ITGA11Q9UKX5 1188 aa9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 MRPL42Q9Y6G3 142 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-207ENST00000503974 UGT1A9O60656 530 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms