RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
UBE2B-203ENST00000503080 DYTNA2CJ06 578 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 CTPS1P17812 591 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 ERVFC1-1P60608 527 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 LPIN1Q14693 890 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 SLC18A3Q16572 532 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 KIF19Q2TAC6 998 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 ADCK5Q3MIX3 580 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 ANKRD45Q5TZF3 282 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 ANO1Q5XXA6 986 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 CUZD1Q86UP6 607 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 SUGP1Q8IWZ8 645 aaKnown RBP4.31□□□□□ -1.72
UBE2B-203ENST00000503080 ZMIZ2Q8NF64 920 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 SPPL3Q8TCT6 385 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 DNASE2BQ8WZ79 361 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 HSPH1Q92598 858 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 YME1L1Q96TA2 773 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 DDX31Q9H8H2 851 aaKnown RBP4.31□□□□□ -1.72
UBE2B-203ENST00000503080 TXLNGQ9NUQ3 528 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 ICAM5Q9UMF0 924 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 SLC45A1Q9Y2W3 748 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 COMMD10Q9Y6G5 202 aa4.31□□□□□ -1.72
UBE2B-203ENST00000503080 SRRM3A6NNA2 597 aaPredicted RBP4.3□□□□□ -1.72
UBE2B-203ENST00000503080 TIMM23O14925 209 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 ANP32CO43423 234 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 LDHAP00338 332 aaKnown RBP4.3□□□□□ -1.72
UBE2B-203ENST00000503080 MYF6P23409 242 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 MT3P25713 68 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 RPL3P39023 403 aaKnown RBP4.3□□□□□ -1.72
UBE2B-203ENST00000503080 GRK6P43250 576 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 CENPAP49450 140 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
UBE2B-203ENST00000503080 DCAF6Q58WW2 860 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 RETSATQ6NUM9 610 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 MON1AQ86VX9 555 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 CHD1LQ86WJ1 897 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 DENND6AQ8IWF6 608 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 CCT6BQ92526 530 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 RNF183Q96D59 192 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 DUX5Q96PT3 197 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 RETREG1Q9H6L5 497 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 NOD2Q9HC29 1040 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 SUFUQ9UMX1 484 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 GDAQ9Y2T3 454 aa4.3□□□□□ -1.72
UBE2B-203ENST00000503080 LOC102724159A0A0B4J2E5 919 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 SLC16A5O15375 505 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 LDB3O75112 727 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 ZNF432O94892 652 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 CHRM4P08173 479 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 DHRS4L1P0CG22 281 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 DAOP14920 347 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 TTKP33981 857 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 ST3GAL1Q11201 340 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 PWP2Q15269 919 aaKnown RBP4.29□□□□□ -1.72
UBE2B-203ENST00000503080 SF3B4Q15427 424 aaKnown RBP eCLIP4.29□□□□□ -1.722e-20■■■■□ 19.3
UBE2B-203ENST00000503080 ZNF628Q5EBL2 1059 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 C2CD5Q86YS7 1000 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 HERC6Q8IVU3 1022 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 MB21D2Q8IYB1 491 aaPredicted RBP4.29□□□□□ -1.72
UBE2B-203ENST00000503080 LILRB1Q8NHL6 650 aaPredicted RBP4.29□□□□□ -1.72
UBE2B-203ENST00000503080 TRIB2Q92519 343 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 TBC1D20Q96BZ9 403 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 IGSF21Q96ID5 467 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 STN1Q9H668 368 aaKnown RBP4.29□□□□□ -1.72
UBE2B-203ENST00000503080 RASSF1Q9NS23 344 aa4.29□□□□□ -1.72
UBE2B-203ENST00000503080 SPATS2LQ9NUQ6 558 aaKnown RBP4.29□□□□□ -1.72
UBE2B-203ENST00000503080 IFT80Q9P2H3 777 aaPredicted RBP4.29□□□□□ -1.72
UBE2B-203ENST00000503080 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 A0A0U1RQJ8 604 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 J3KR12 359 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 CAMTA2O94983 1202 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 VNN2O95498 520 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 CH25HO95992 272 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 SNRNP70P08621 437 aaKnown RBP4.28□□□□□ -1.72
UBE2B-203ENST00000503080 TFPIP10646 304 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 LIFRP42702 1097 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 MYBPHQ13203 477 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 XKR9Q5GH70 373 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 FAM76BQ5HYJ3 339 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 IL20RBQ6UXL0 311 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 PRSS45Q7RTY3 260 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 PGBD5Q8N414 524 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 AADATQ8N5Z0 425 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 WFIKKN2Q8TEU8 576 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 GDPD5Q8WTR4 605 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 TMEM170AQ8WVE7 144 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 ADGRG7Q96K78 797 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 COG8Q96MW5 612 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 ARPC5LQ9BPX5 153 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 CLSTN3Q9BQT9 956 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 SLC32A1Q9H598 525 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 ITM2CQ9NQX7 267 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
UBE2B-203ENST00000503080 ADGRF5Q8IZF2 1346 aa4.27□□□□□ -1.73
UBE2B-203ENST00000503080 VWA3AA6NCI4 1184 aa4.27□□□□□ -1.73
UBE2B-203ENST00000503080 PEX12O00623 359 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms