RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 C10orf88Q9H8K7 445 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 NT5MQ9NPB1 228 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 C2orf42Q9NWW7 574 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 SMARCAL1Q9NZC9 954 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 LHX3Q9UBR4 397 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 AMACRQ9UHK6 382 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 ZNF148Q9UQR1 794 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 MUC22E2RYF6 1773 aaPredicted RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 RALGAPA1Q6GYQ0 2036 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 GOLGA6L10A0A0M3HER8 536 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 TCRBV21S2A2A0A5A6 115 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 KRIT1O00522 736 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 KCNN4O15554 427 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 LIASO43766 372 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 URI1O94763 535 aaPredicted RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 STK10O94804 968 aaKnown RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 POP4O95707 220 aaKnown RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 CSTF1Q05048 431 aaKnown RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 ELAVL3Q14576 367 aaKnown RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 MYLK3Q32MK0 819 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 TEX44Q53QW1 395 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 ATXN7L2Q5T6C5 722 aaPredicted RBP20.31■□□□□ 0.84
CTSD-206ENST00000497544 DPY19L3Q6ZPD9 716 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 PID1Q7Z2X4 250 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 DSG4Q86SJ6 1040 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 CREG2Q8IUH2 290 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 PGBD3Q8N328 593 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 OR2T3Q8NH03 318 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 VAT1Q99536 393 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 HEPHQ9BQS7 1158 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 TTLL3Q9Y4R7 772 aa20.31■□□□□ 0.84
CTSD-206ENST00000497544 CFAP69A5D8W1 941 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 STIP1P31948 543 aaKnown RBP20.3■□□□□ 0.84
CTSD-206ENST00000497544 CHRNA3P32297 505 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 CSNK1DP48730 415 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 SCNN1BP51168 640 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 SPEM2Q0P670 501 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 SRLQ86TD4 932 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 TMPRSS6Q8IU80 811 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 CAMKK1Q8N5S9 505 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 MAGOHBQ96A72 148 aaKnown RBP20.3■□□□□ 0.84
CTSD-206ENST00000497544 EXOC2Q96KP1 924 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 AGAP3Q96P47 875 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 HHIPQ96QV1 700 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 FAM129BQ96TA1 746 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 TMEM121Q9BTD3 319 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 BCCIPQ9P287 314 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTSD-206ENST00000497544 EVLQ9UI08 416 aaPredicted RBP20.3■□□□□ 0.84
CTSD-206ENST00000497544 GMEB2Q9UKD1 530 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 ZMIZ1Q9ULJ6 1067 aa20.3■□□□□ 0.84
CTSD-206ENST00000497544 DRG1Q9Y295 367 aaKnown RBP20.3■□□□□ 0.84
CTSD-206ENST00000497544 ALOX15BO15296 676 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 PTPN3P26045 913 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 CCNHP51946 323 aaPredicted RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 MAXP61244 160 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 ZBTB17Q13105 803 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 N4BP2L1Q5TBK1 243 aaPredicted RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 DRICH1Q6PGQ1 229 aaPredicted RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 MMAAQ8IVH4 418 aaKnown RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 PGBD5Q8N414 524 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 PRELID2Q8N945 189 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 CHST14Q8NCH0 376 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 OR6K2Q8NGY2 324 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 HMGB4Q8WW32 186 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 MGME1Q9BQP7 344 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 CEP41Q9BYV8 373 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 POLR1EQ9GZS1 481 aaKnown RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 RSPH9Q9H1X1 276 aaPredicted RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 USP29Q9HBJ7 922 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 SCUBE2Q9NQ36 999 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 ZSCAN32Q9NX65 697 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 KLHL8Q9P2G9 620 aaPredicted RBP20.29■□□□□ 0.84
CTSD-206ENST00000497544 IL36AQ9UHA7 158 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 TRHDEQ9UKU6 1024 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 ATP8A1Q9Y2Q0 1164 aa20.29■□□□□ 0.84
CTSD-206ENST00000497544 ESPNB1AK53 854 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 RNF103O00237 685 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 MUSKO15146 869 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 APBB3O95704 486 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 IL1BP01584 269 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 PRNPP04156 253 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 HLA-DQB2P05538 268 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 CES1P23141 567 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 RGRP47804 291 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 COPAP53621 1224 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 WASHC5Q12768 1159 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 GRM3Q14832 879 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 ARSIQ5FYB1 569 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 FAM46CQ5VWP2 391 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 ZNF776Q68DI1 518 aaPredicted RBP20.28■□□□□ 0.84
CTSD-206ENST00000497544 ANO7Q6IWH7 933 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.28■□□□□ 0.84
CTSD-206ENST00000497544 CNTD1Q8N815 330 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 PRCCQ92733 491 aaPredicted RBP20.28■□□□□ 0.84
CTSD-206ENST00000497544 NELL1Q92832 810 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 SIPA1Q96FS4 1042 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 LRIG1Q96JA1 1093 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 TEKT5Q96M29 485 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms