RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ZNF217O75362 1048 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 LATS1O95835 1130 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 IGLV3-27P01718 113 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 HOXD9P28356 352 aaPredicted RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 HLA-FP30511 346 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 L1CAMP32004 1257 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 IL12RB1P42701 662 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 PTGER3P43115 390 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 YWHAZP63104 245 aaKnown RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 ZNF234Q14588 700 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 VWA3BQ502W6 1294 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 STPG1Q5TH74 334 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 SYPL2Q5VXT5 272 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 NUGGCQ68CJ6 796 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 TMEM215Q68D42 235 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 IL31Q6EBC2 164 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 RFWD3Q6PCD5 774 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 TMEM110Q86TL2 294 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 WDTC1Q8N5D0 677 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 DQX1Q8TE96 717 aaKnown RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 SORCS1Q8WY21 1168 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 SHC3Q92529 594 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 MRGPRX1Q96LB2 322 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 SLC6A17Q9H1V8 727 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 PIF1Q9H611 641 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 CD248Q9HCU0 757 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 SIX2Q9NPC8 291 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 SAMSN1Q9NSI8 373 aaKnown RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 THAP10Q9P2Z0 257 aaPredicted RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 CYTH4Q9UIA0 394 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 ACSL6Q9UKU0 697 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 TRBV23OR9-2A0A075B6M9 112 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 IGHV1OR15-9A0A0B4J2B8 117 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PATE3B3GLJ2 98 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 KCNJ18B7U540 433 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 NPC1O15118 1278 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 AP5Z1O43299 807 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 DLX3O60479 287 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SYNCRIPO60506 623 aaKnown RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 TBL1XO60907 577 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 FAM153BP0C7A2 387 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PABPC1P11940 636 aaKnown RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 PRKCAP17252 672 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SLC6A4P31645 630 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 KRT9P35527 623 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SGSHP51688 502 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 LIMK1P53667 647 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 IRX4P78413 519 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PDCLQ13371 301 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 ENPP2Q13822 863 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 KCNJ12Q14500 433 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 STARD3Q14849 445 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 EIF4HQ15056 248 aaKnown RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 E2F5Q15329 346 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 TAF5Q15542 800 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 MEA1Q16626 185 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 FUT11Q495W5 492 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 FAM133BQ5BKY9 247 aaKnown RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 CT47A1Q5JQC4 288 aaPredicted RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 MIIPQ5JXC2 388 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SPDYCQ5MJ68 293 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 MPP7Q5T2T1 576 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PIK3R6Q5UE93 754 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 LYSMD4Q5XG99 296 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 MBLAC2Q68D91 279 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 KIAA1324Q6UXG2 1013 aaKnown RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 SERPINA13PQ6UXR4 307 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SLC36A4Q6YBV0 504 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 CHST9Q7L1S5 443 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SYT12Q8IV01 421 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PASD1Q8IV76 773 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 NUP43Q8NFH3 380 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 AZIN2Q96A70 460 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 LIN37Q96GY3 246 aaPredicted RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 SLC39A13Q96H72 371 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 SERPINB11Q96P15 392 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 DDX50Q9BQ39 737 aaKnown RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 TRIM62Q9BVG3 475 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 LHX5Q9H2C1 402 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 PRDM16Q9HAZ2 1276 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 POPDC2Q9HBU9 364 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 TMEM74BQ9NUR3 256 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 ABCB8Q9NUT2 735 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 TMEFF2Q9UIK5 374 aaPredicted RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 GGA2Q9UJY4 613 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 AJAP1Q9UKB5 411 aaPredicted RBP8.36□□□□□ -1.07
RIF1-211ENST00000494333 PLA2G4CQ9UP65 541 aa8.36□□□□□ -1.07
RIF1-211ENST00000494333 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 TYW5A2RUC4 315 aaKnown RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 C4orf47A7E2U8 309 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 IRAK2O43187 625 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 NDUFS2O75306 463 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 TRUB2O95900 331 aaKnown RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 MOCS2O96007 188 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms