RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 HECAQ9UBI9 543 aaPredicted RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 MMP17Q9ULZ9 603 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SIT1Q9Y3P8 196 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SMAPO00193 183 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 INSIG1O15503 277 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 HLA-DQB2P05538 268 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 CR2P20023 1033 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 IL12RB1P42701 662 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 PTGIRP43119 386 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 SCNN1BP51168 640 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 GDF10P55107 478 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 CDK16Q00536 496 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 CCDC15Q0P6D6 951 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 MPP3Q13368 585 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 EMC10Q5UCC4 262 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 FAM46CQ5VWP2 391 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 PCGF5Q86SE9 256 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 JAMLQ86YT9 394 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 SFTPA1Q8IWL2 248 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 RYBPQ8N488 228 aaPredicted RBP12.59□□□□□ -0.39
SNX17-208ENST00000493711 TXNDC5Q8NBS9 432 aaKnown RBP12.59□□□□□ -0.39
SNX17-208ENST00000493711 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 TMIEQ8NEW7 156 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 OR2A12Q8NGT7 310 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 HCAR2Q8TDS4 363 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 LRRN4Q8WUT4 740 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 IMP4Q96G21 291 aaKnown RBP12.59□□□□□ -0.39
SNX17-208ENST00000493711 ZNF641Q96N77 438 aaPredicted RBP12.59□□□□□ -0.39
SNX17-208ENST00000493711 SEMA3CQ99985 751 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 C10orf88Q9H8K7 445 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
SNX17-208ENST00000493711 TTLL3Q9Y4R7 772 aa12.59□□□□□ -0.39
SNX17-208ENST00000493711 E7EVH7 732 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 AP3B1O00203 1094 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 SOCS5O75159 536 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.4
SNX17-208ENST00000493711 SLU7O95391 586 aaKnown RBP12.58□□□□□ -0.4
SNX17-208ENST00000493711 COL4A2P08572 1712 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 HOXB2P14652 356 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 NFKB1P19838 968 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 PRKCHP24723 683 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 NFKBIAP25963 317 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 SERPINA4P29622 427 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
SNX17-208ENST00000493711 ADCY8P40145 1251 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 NUMBP49757 651 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 CLCN5P51795 746 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 CCNHP51946 323 aaPredicted RBP12.58□□□□□ -0.4
SNX17-208ENST00000493711 DGKEP52429 567 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 ZBTB16Q05516 673 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 BCL2L1Q07817 233 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 C6orf132Q5T0Z8 1188 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 C9orf64Q5T6V5 341 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 Q6ZVU0 165 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 SYT13Q7L8C5 426 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 PGBD5Q8N414 524 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 SPEM1Q8N4L4 309 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 ARRDC2Q8TBH0 407 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 PTPRN2Q92932 1015 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 PPP1R16AQ96I34 528 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 ACOX2Q99424 681 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 TM6SF2Q9BZW4 377 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 KCNH6Q9H252 994 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 TNKS2Q9H2K2 1166 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 POLMQ9NP87 494 aaPredicted RBP12.58□□□□□ -0.4
SNX17-208ENST00000493711 PRSS16Q9NQE7 514 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 IL36AQ9UHA7 158 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 ASIC3Q9UHC3 531 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 HCN2Q9UL51 889 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 SCML1Q9UN30 329 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 NEU2Q9Y3R4 380 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 ACTL7AQ9Y615 435 aa12.58□□□□□ -0.4
SNX17-208ENST00000493711 COL4A3Q01955 1670 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 TMEM221A6NGB7 291 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 EFCAB8A8MWE9 144 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 C1QTNF3-AMACRE9PGA6 284 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 M0R296 226 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 MUSKO15146 869 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 TTI1O43156 1089 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 SIN3BO75182 1162 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 ADH1BP00325 375 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 EPOP01588 193 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 CD68P34810 354 aaPredicted RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 SUOXP51687 545 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 RPL26P61254 145 aaKnown RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 SARNPP82979 210 aaKnown RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 GPS1Q13098 491 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 FZD5Q13467 585 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 SEMA5AQ13591 1074 aa12.57□□□□□ -0.4
SNX17-208ENST00000493711 ATXN7L2Q5T6C5 722 aaPredicted RBP12.57□□□□□ -0.4
SNX17-208ENST00000493711 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms