RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 CCAR2Q8N163 923 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 NAT16Q8N8M0 369 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 WFDC5Q8TCV5 224 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TEKT4Q8WW24 435 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 PPP1R9BQ96SB3 815 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 PACSIN1Q9BY11 444 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TRIM7Q9C029 511 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 ADAM19Q9H013 955 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TMEM245Q9H330 911 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 DNAJC17Q9NVM6 304 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 ELOVL2Q9NXB9 296 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 PLK2Q9NYY3 685 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 FRRS1LQ9P0K9 344 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 IP6K2Q9UHH9 426 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 MMP17Q9ULZ9 603 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 NDRG2Q9UN36 371 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 MYO16Q9Y6X6 1858 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 MYOFQ9NZM1 2061 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 SPAARA0A1B0GVQ0 90 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 A0A1W2PQF6 199 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ILVBLA1L0T0 632 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ANTXRLA6NF34 631 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ZNF487B1APH4 448 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 C10orf142B7Z368 130 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 E9PAM4 449 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 FAM72CH0Y354 149 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 TSPAN3O60637 253 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ADAM23O75077 832 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CNTN5O94779 1100 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 LRIG2O94898 1065 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PROSCO94903 275 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ASLP04424 464 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 DLDP09622 509 aaKnown RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 PABPC1P11940 636 aaKnown RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 CEACAM1P13688 526 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 IL4RP24394 825 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PSMA2P25787 234 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 IL1R2P27930 398 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 MIPP30301 263 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CYLC1P35663 651 aaPredicted RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 SLC1A1P43005 524 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 MAPKAPK2P49137 400 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 SLC25A11Q02978 314 aaKnown RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 CFHR1Q03591 330 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PCDH1Q08174 1060 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 LMAN2Q12907 356 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CRY1Q16526 586 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 DPYSL2Q16555 572 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PLEKHG6Q3KR16 790 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ALFQ53S48 1182 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 SNAP47Q5SQN1 464 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 FAM72AQ5TYM5 149 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 EMC10Q5UCC4 262 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 LRRC38Q5VT99 294 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 AFMIDQ63HM1 303 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 FAM72DQ6L9T8 149 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PKN3Q6P5Z2 889 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PCSK4Q6UW60 755 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 LRRC31Q6UY01 552 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 RAD9BQ6WBX8 426 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 Q6ZS52 159 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 TRMT11Q7Z4G4 463 aaKnown RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 POLNQ7Z5Q5 900 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ANKS1BQ7Z6G8 1248 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CHSY1Q86X52 802 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 FAM72BQ86X60 149 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 AHI1Q8N157 1196 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 UMODL1-AS1Q8N2C9 162 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CCDC185Q8N715 623 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 GOLM1Q8NBJ4 401 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 OR52K2Q8NGK3 314 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 SLC35G2Q8TBE7 412 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CTNNBL1Q8WYA6 563 aaPredicted RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 RFFLQ8WZ73 363 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ACDQ96AP0 544 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PDLIM2Q96JY6 352 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PEBP4Q96S96 227 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 BAG1Q99933 345 aaPredicted RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 FEM1AQ9BSK4 669 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 EDEM2Q9BV94 578 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 NUP85Q9BW27 656 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ACE2Q9BYF1 805 aaPredicted RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 MAGEB5Q9BZ81 275 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ZYG11BQ9C0D3 744 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 KLC2Q9H0B6 622 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 DEF6Q9H4E7 631 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 CCDC86Q9H6F5 360 aaKnown RBP6.9□□□□□ -1.3
VPS52-219ENST00000493379 GRPEL1Q9HAV7 217 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 SPTLC3Q9NUV7 552 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 TMEM248Q9NWD8 314 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 C2orf42Q9NWW7 574 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 GGA2Q9UJY4 613 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 TRIM33Q9UPN9 1127 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 PCDHA13Q9Y5I0 950 aa6.9□□□□□ -1.3
VPS52-219ENST00000493379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
VPS52-219ENST00000493379 TYW5A2RUC4 315 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms