RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TMEM88Q6PEY1 159 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 RTL10Q7L3V2 364 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 PRRT2Q7Z6L0 340 aaPredicted RBP5.46□□□□□ -1.54
SND1-216ENST00000492840 TMPRSS6Q8IU80 811 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 TMEM132CQ8N3T6 1108 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 NAT8LQ8N9F0 302 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 IL17RCQ8NAC3 791 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 NEK9Q8TD19 979 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 MGARPQ8TDB4 240 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 NACC2Q96BF6 587 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 MIEF2Q96C03 454 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 PGAM5Q96HS1 289 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 ZNF845Q96IR2 970 aaPredicted RBP5.46□□□□□ -1.54
SND1-216ENST00000492840 PRR25Q96S07 402 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 TRIM31Q9BZY9 425 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 MEGF9Q9H1U4 602 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.46□□□□□ -1.548e-7■■■■□ 20
SND1-216ENST00000492840 C20orf141Q9NUB4 165 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 SESN1Q9Y6P5 492 aa5.46□□□□□ -1.54
SND1-216ENST00000492840 SMG6Q86US8 1419 aaKnown RBP5.46□□□□□ -1.54
SND1-216ENST00000492840 CCNT1O60563 726 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 RPS6KA4O75676 772 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 SEC31AO94979 1220 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 MBPP02686 304 aaPredicted RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 PRR35P0CG20 571 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 GJC1P36383 396 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 RRP1P56182 461 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 TXNL4AP83876 142 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 NIPAL4Q0D2K0 466 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 WASHC5Q12768 1159 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 FOXL1Q12952 345 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 CSTF3Q12996 717 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 FRG1Q14331 258 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 MLANAQ16655 118 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 CYP1B1Q16678 543 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 GSTA3Q16772 222 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 ZNF628Q5EBL2 1059 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 C9orf152Q5JTZ5 239 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 SP5Q6BEB4 398 aaPredicted RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 SLC2A7Q6PXP3 512 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 MAMDC4Q6UXC1 1216 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 USP51Q70EK9 711 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 PARS2Q7L3T8 475 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 FAM124AQ86V42 546 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 TAX1BP1Q86VP1 789 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 TICAM1Q8IUC6 712 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 D2HGDHQ8N465 521 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 PNPLA1Q8N8W4 532 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 C11orf65Q8NCR3 313 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 OR6J1Q8NGC5 347 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 C2CD4CQ8TF44 421 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 RNF31Q96EP0 1072 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 FNBP1Q96RU3 617 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 DCLRE1CQ96SD1 692 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 FIZ1Q96SL8 496 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 IKZF4Q9H2S9 585 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 TRPV4Q9HBA0 871 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 INTS13Q9NVM9 706 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 FAM53CQ9NYF3 392 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 SELENONQ9NZV5 590 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 WDR35Q9P2L0 1181 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 ANAPC5Q9UJX4 755 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 VPS4AQ9UN37 437 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 PTRH2Q9Y3E5 179 aaKnown RBP5.45□□□□□ -1.54
SND1-216ENST00000492840 TRPV2Q9Y5S1 764 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 TTC21BQ7Z4L5 1316 aa5.45□□□□□ -1.54
SND1-216ENST00000492840 hCG_1809904A0A1W2PP81 198 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 A0A1W2PPE2 198 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 A0A1W2PR64 198 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 EIF3CLB5ME19 914 aaKnown RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 SNAP23O00161 211 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 TAF4O00268 1085 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 HBP1O60381 514 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 PRAMEF2O60811 474 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 GOSR1O95249 250 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 SLU7O95391 586 aaKnown RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 FESP07332 822 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 MYBL1P10243 752 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 PKMP14618 531 aaKnown RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 CHRNA5P30532 468 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 FMO4P31512 558 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 CLK3P49761 638 aaKnown RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 VAV2P52735 878 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 RRP1BQ14684 758 aaKnown RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 ASTE1Q2TB18 679 aaPredicted RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 MMEL1Q495T6 779 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 KRBOX4Q5JUW0 171 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 KIAA0930Q6ICG6 404 aaPredicted RBP5.44□□□□□ -1.54
SND1-216ENST00000492840 KRT80Q6KB66 452 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 SLC39A5Q6ZMH5 540 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 ARHGEF18Q6ZSZ5 1173 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 CCDC186Q7Z3E2 898 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 MON2Q7Z3U7 1717 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 RNF144BQ7Z419 303 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 CCDC91Q7Z6B0 441 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 KIAA2013Q8IYS2 634 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 NUP93Q8N1F7 819 aa5.44□□□□□ -1.54
SND1-216ENST00000492840 SYT2Q8N9I0 419 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms