RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 KIAA1161Q6NSJ0 714 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 C11orf63Q6NUN7 778 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 GDPD4Q6W3E5 623 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 ARHGAP36Q6ZRI8 547 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 TMEM139Q8IV31 216 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 BBS5Q8N3I7 341 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 PCDH19Q8TAB3 1148 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 HCAR2Q8TDS4 363 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 NSMCE1Q8WV22 266 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 VOPP1Q96AW1 172 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 SKA1Q96BD8 255 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 EXOC2Q96KP1 924 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 PSKH2Q96QS6 385 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 TUBGCP5Q96RT8 1024 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 KLHL11Q9NVR0 708 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 DKK3Q9UBP4 350 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 SEPT3Q9UH03 358 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 TSPAN11A1L157 253 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 LRRD1A4D1F6 860 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 C4orf47A7E2U8 309 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 TSPAN6O43657 245 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 MFSD11O43934 449 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 BUB1BO60566 1050 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 OPHN1O60890 802 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 RNGTTO60942 597 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 CER1O95813 267 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 KRT1P04264 644 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 MX2P20592 715 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 COMTP21964 271 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 GKP32189 559 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 SUOXP51687 545 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 VAV2P52735 878 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 GSDMDP57764 484 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 AP1S1P61966 158 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 FOXK2Q01167 660 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 GALNT2Q10471 571 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF235Q14590 738 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC45A4Q5BKX6 768 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 RALGPS1Q5JS13 557 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 TIGD7Q6NT04 549 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 RAD9BQ6WBX8 426 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ERMP1Q7Z2K6 904 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ADAT2Q7Z6V5 191 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 HORMAD1Q86X24 394 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 TP53INP2Q8IXH6 220 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 MINDY1Q8N5J2 469 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 SPC24Q8NBT2 197 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 NETO2Q8NC67 525 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 TSEN2Q8NCE0 465 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 RAPGEF5Q92565 580 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 SERAC1Q96JX3 654 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF641Q96N77 438 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC6A18Q96N87 628 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF830Q96NB3 372 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 KLHL32Q96NJ5 620 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ATP13A3Q9H7F0 1226 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 EBF2Q9HAK2 575 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 HAUS2Q9NVX0 235 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 FADS3Q9Y5Q0 445 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLCO1B1Q9Y6L6 691 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 ANKRD36A6QL64 1941 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 CACNA1EQ15878 2313 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 WDR87Q6ZQQ6 2873 aa10.79□□□□□ -0.68
CDC42SE1-206ENST00000492796 CEP250Q9BV73 2442 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 SHROOM3Q8TF72 1996 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 A0A1W2PQU0 124 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 C3orf70A6NLC5 250 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 PRAMEF26H0Y7S4 382 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 TM4SF5O14894 197 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 VILLO15195 856 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 PJA2O43164 708 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 MAGEC1O60732 1142 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 PCDH8O95206 1070 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 PEX11BO96011 259 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF883P0CG24 379 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZFXP17010 805 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 CD38P28907 300 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 SERPINA4P29622 427 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 MAT2AP31153 395 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 ABL2P42684 1182 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 CSNK1EP49674 416 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 C21orf59P57076 290 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 RPS21P63220 83 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC10A7Q0GE19 358 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 ELP6Q0PNE2 266 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 OVGP1Q12889 678 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC14A1Q13336 389 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 IFI16Q16666 785 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 TMEM259Q4ZIN3 620 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 CFAP58Q5T655 872 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 MARC1Q5VT66 337 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 SLC9A4Q6AI14 798 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 BRAT1Q6PJG6 821 aa10.78□□□□□ -0.68
CDC42SE1-206ENST00000492796 DGLUCYQ7Z3D6 616 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms