RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 RABEPKQ7Z6M1 372 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF677Q86XU0 584 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SPATS2Q86XZ4 545 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 NAXDQ8IW45 347 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 DRC7Q8IY82 874 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 TBC1D3Q8IZP1 549 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ATP11CQ8NB49 1132 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 OR2A12Q8NGT7 310 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 OR2T34Q8NGX1 318 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 PIP4K2CQ8TBX8 421 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 OR8D1Q8WZ84 308 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 CENPIQ92674 756 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SPAG5Q96R06 1193 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ERGIC2Q96RQ1 377 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 HAPLN3Q96S86 360 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 KLC2Q9H0B6 622 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 FBRSQ9HAH7 460 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 ADAM22Q9P0K1 906 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC25A13Q9UJS0 675 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 PCOLCE2Q9UKZ9 415 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 STAP1Q9ULZ2 295 aa7.48□□□□□ -1.21
PRPF4B-208ENST00000490653 APC2O95996 2303 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 NYNRINQ9P2P1 1898 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 TDRD6O60522 2096 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SIGLEC16A6NMB1 481 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 TMEM229AB2RXF0 380 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 CDK2AP1O14519 115 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC31A1O15431 190 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 CCP110O43303 1012 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 LRIG2O94898 1065 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 FTH1P19P0C7X4 201 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 KRT3P12035 628 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SKILP12757 684 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ITIH2P19823 946 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 OR1E1P30953 314 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 CHRNA3P32297 505 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 AFF3P51826 1226 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 RACK1P63244 317 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC14A1Q13336 389 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ELAVL3Q14576 367 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 IQCB1Q15051 598 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF423Q2M1K9 1284 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 NKAPLQ5M9Q1 402 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 PIP5KL1Q5T9C9 394 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 MANEALQ5VSG8 457 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 TTC39BQ5VTQ0 682 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 AGBL4Q5VU57 503 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 CAVIN1Q6NZI2 390 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 LRRC31Q6UY01 552 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 KDM7AQ6ZMT4 941 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 DPY19L3Q6ZPD9 716 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 PDZD3Q86UT5 571 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 NLRP14Q86W24 1093 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 PHF13Q86YI8 300 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 BAHD1Q8TBE0 780 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 MDM1Q8TC05 714 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 FAM172AQ8WUF8 416 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 FAM131CQ96AQ9 280 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 MYOCQ99972 504 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SYT11Q9BT88 431 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 FUCA2Q9BTY2 467 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ACE2Q9BYF1 805 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 TRIM7Q9C029 511 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ZDHHC5Q9C0B5 715 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ZYG11BQ9C0D3 744 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 OSBPL2Q9H1P3 480 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 PCED1AQ9H1Q7 454 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 NOL6Q9H6R4 1146 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 OSGEPQ9NPF4 335 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 FZD3Q9NPG1 666 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 AASDHPPTQ9NRN7 309 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SEPT11Q9NVA2 429 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 GPATCH2LQ9NWQ4 482 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 SCML1Q9UN30 329 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ZFR2Q9UPR6 939 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 NEU3Q9UQ49 428 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 KALRNO60229 2985 aa7.47□□□□□ -1.21
PRPF4B-208ENST00000490653 ARID1BQ8NFD5 2236 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ELOA3CA0A087WX78 387 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 A0A1B0GTQ1 180 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ILVBLA1L0T0 632 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 LRRC72A6NJI9 287 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 A6NJY4 79 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 KPNA3O00505 521 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 VILLO15195 856 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 PLRG1O43660 514 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 RNGTTO60942 597 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 LEFTY1O75610 366 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 C1QL1O75973 258 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 DKK1O94907 266 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 PLEKP08567 350 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 PRLRP16471 622 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 TNFAIP3P21580 790 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 GPD1P21695 349 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 CD38P28907 300 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 GRIA4P48058 902 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 DNA2P51530 1060 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 CCR5P51681 352 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms