RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PSTPIP1O43586 416 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 AP1G1O43747 822 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 RNGTTO60942 597 aaKnown RBP17.57■□□□□ 0.4
MDC1-206ENST00000489540 MX2P20592 715 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 HSPA9P38646 679 aaKnown RBP17.57■□□□□ 0.4
MDC1-206ENST00000489540 MAPK8P45983 427 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 VAV2P52735 878 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 IL27RAQ6UWB1 636 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 PARS2Q7L3T8 475 aaKnown RBP17.57■□□□□ 0.4
MDC1-206ENST00000489540 SRLQ86TD4 932 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 ZSCAN30Q86W11 494 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 PQLC3Q8N755 202 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 TPCN2Q8NHX9 752 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 VOPP1Q96AW1 172 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 FEM1CQ96JP0 617 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 ZNF641Q96N77 438 aaPredicted RBP17.57■□□□□ 0.4
MDC1-206ENST00000489540 GTPBP2Q9BX10 602 aaKnown RBP17.57■□□□□ 0.4
MDC1-206ENST00000489540 EBF2Q9HAK2 575 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 DMTF1Q9Y222 760 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 REXO2Q9Y3B8 237 aaKnown RBP17.57■□□□□ 0.4
MDC1-206ENST00000489540 HYOU1Q9Y4L1 999 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 FADS3Q9Y5Q0 445 aa17.57■□□□□ 0.4
MDC1-206ENST00000489540 RCCD1A6NED2 376 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
MDC1-206ENST00000489540 INSIG1O15503 277 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 PJA2O43164 708 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 PCDH8O95206 1070 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 PEX11BO96011 259 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 KRT1P04264 644 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 TNNT1P13805 278 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 ZFXP17010 805 aaPredicted RBP17.56■□□□□ 0.4
MDC1-206ENST00000489540 GARSP41250 739 aaKnown RBP17.56■□□□□ 0.4
MDC1-206ENST00000489540 GRIA4P48058 902 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 CSNK1EP49674 416 aaKnown RBP17.56■□□□□ 0.4
MDC1-206ENST00000489540 SUOXP51687 545 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 NAP1L1P55209 391 aaKnown RBP17.56■□□□□ 0.4
MDC1-206ENST00000489540 PPP2CBP62714 309 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 PPP2CAP67775 309 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 SLC10A7Q0GE19 358 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 GALNT2Q10471 571 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 MARC1Q5VT66 337 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 DAAM2Q86T65 1068 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 KIAA1328Q86T90 577 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 TTC7BQ86TV6 843 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 HORMAD1Q86X24 394 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 ACRBPQ8NEB7 543 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.56■□□□□ 0.4
MDC1-206ENST00000489540 SERAC1Q96JX3 654 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 EXOC2Q96KP1 924 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 SUV39H2Q9H5I1 410 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 FSCN3Q9NQT6 498 aa17.56■□□□□ 0.4
MDC1-206ENST00000489540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
MDC1-206ENST00000489540 A0A1W2PQU0 124 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 TSPAN6O43657 245 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 MFSD11O43934 449 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 RPS21P63220 83 aaKnown RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 GRIK2Q13002 908 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 ZNF235Q14590 738 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 NUMA1Q14980 2115 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 IFI16Q16666 785 aaKnown RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 SETMARQ53H47 684 aaPredicted RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 SLC45A4Q5BKX6 768 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 TIGD7Q6NT04 549 aaPredicted RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 ADAT2Q7Z6V5 191 aaKnown RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 FATE1Q969F0 183 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 RNF25Q96BH1 459 aaPredicted RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 TSGA13Q96PP4 275 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 LACRTQ9GZZ8 138 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 ATP13A3Q9H7F0 1226 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 AASDHPPTQ9NRN7 309 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 SALL4Q9UJQ4 1053 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 SLCO1B1Q9Y6L6 691 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 DUSP10Q9Y6W6 482 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 A0A1B0GVT2 93 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 PRAMEF26H0Y7S4 382 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 NEMP1O14524 444 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 APOL1O14791 398 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 VILLO15195 856 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 CCNCP24863 283 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 MAT2AP31153 395 aaKnown RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 SCNN1BP51168 640 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 AP1S1P61966 158 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 KIF5AQ12840 1032 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 HNRNPDQ14103 355 aaKnown RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 SLC9A4Q6AI14 798 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 NAPEPLDQ6IQ20 393 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 KIAA1161Q6NSJ0 714 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 BRAT1Q6PJG6 821 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 MINDY1Q8N5J2 469 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 SLC6A18Q96N87 628 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
MDC1-206ENST00000489540 HAUS2Q9NVX0 235 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 ANKRD6Q9Y2G4 727 aa17.55■□□□□ 0.4
MDC1-206ENST00000489540 RALGAPA1Q6GYQ0 2036 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 NUP205Q92621 2012 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.54■□□□□ 0.4
MDC1-206ENST00000489540 TM4SF5O14894 197 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 MUSKO15146 869 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 MATN3O15232 486 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 OPHN1O60890 802 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms