RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FAM46CQ5VWP2 391 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 SRLQ86TD4 932 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 SLC13A5Q86YT5 568 aaPredicted RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 BBS5Q8N3I7 341 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 DEFB119Q8N690 84 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 TEX26Q8N6G2 289 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 TMIEQ8NEW7 156 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 FATE1Q969F0 183 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 OMDQ99983 421 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 ITM2CQ9NQX7 267 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 RBM22Q9NW64 420 aaKnown RBP eCLIP11.19□□□□□ -0.626e-7■■■□□ 16.7
UBE4B-210ENST00000488228 SMG5Q9UPR3 1016 aaKnown RBP11.19□□□□□ -0.62
UBE4B-210ENST00000488228 JRKLQ9Y4A0 524 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 TMEM131Q92545 1883 aa11.19□□□□□ -0.62
UBE4B-210ENST00000488228 ATXN2Q99700 1313 aaKnown RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 PRR23AA6NEV1 266 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 F5H423 210 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 FANCGO15287 622 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 CEP104O60308 925 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 POP4O95707 220 aaKnown RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 ITGB7P26010 798 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 PTPN3P26045 913 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 CD6P30203 668 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 NBL1P41271 181 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 ABL2P42684 1182 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 RENBPP51606 427 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 ADPRHP54922 357 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 AP1S1P61966 158 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 ITKQ08881 620 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 HNRNPDQ14103 355 aaKnown RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 USP30Q70CQ3 517 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 TMEFF1Q8IYR6 380 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 CNTD1Q8N815 330 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 KLHL32Q96NJ5 620 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 AGAP3Q96P47 875 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 NUDCD1Q96RS6 583 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 IL12RB2Q99665 862 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 SEMA3CQ99985 751 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 GPR174Q9BXC1 333 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 POLR1EQ9GZS1 481 aaKnown RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 NEUROG2Q9H2A3 272 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 C6orf106Q9H6K1 298 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 NOD2Q9HC29 1040 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 DYRK4Q9NR20 520 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 FZD4Q9ULV1 537 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 SCML1Q9UN30 329 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 ITM2BQ9Y287 266 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 EP300Q09472 2414 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF292O60281 2723 aa11.18□□□□□ -0.62
UBE4B-210ENST00000488228 RIF1Q5UIP0 2472 aaKnown RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 GVINP1Q7Z2Y8 2422 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 CACNA1EQ15878 2313 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 HACD1B0YJ81 288 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 SPINT1O43278 529 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 MAP3K13O43283 966 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 NDUFS2O75306 463 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 SEMA4FO95754 770 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 FGGP02679 453 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 RBP3P10745 1247 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 RBL1P28749 1068 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 SERPINA4P29622 427 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 CNR2P34972 360 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 CSNK1DP48730 415 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 NEK3P51956 506 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 PPP2CBP62714 309 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 PPP2CAP67775 309 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 RAD51Q06609 339 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 NIPAL4Q0D2K0 466 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 WASHC5Q12768 1159 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 TRAF2Q12933 501 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 BYSLQ13895 437 aaKnown RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 IHHQ14623 411 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 SIX1Q15475 284 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 PLK5Q496M5 336 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF805Q5CZA5 627 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 PMS2CLQ68D20 193 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 ALG1LQ6GMV1 187 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 NCEH1Q6PIU2 408 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 GDPD4Q6W3E5 623 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 ERN2Q76MJ5 926 aaKnown RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 ZSWIM9Q86XI8 627 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 COG1Q8WTW3 980 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 HTR3CQ8WXA8 447 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 FAM131CQ96AQ9 280 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 MS4A14Q96JA4 679 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms