RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PLD5	Q8N7P1	536 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	NETO2	Q8NC67	525 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	ALG14	Q96F25	216 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	SIPA1	Q96FS4	1042 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	CELF6	Q96J87	481 aa	Known RBP	13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	MTG2	Q9H4K7	406 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	PRSS16	Q9NQE7	514 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	ITM2C	Q9NQX7	267 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	NDFIP2	Q9NV92	336 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	DONSON	Q9NYP3	566 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	SMARCAL1	Q9NZC9	954 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	SUSD2	Q9UGT4	822 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	EFR3B	Q9Y2G0	817 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	HEY1	Q9Y5J3	304 aa		13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.32	□□□□□ -0.28
NR1H3-223	ENST00000486991	PLXNA2	O75051	1894 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	TMEM131	Q92545	1883 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	PLXNB3	Q9ULL4	1909 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	TCRBV7S2A1N4T	A0A589	114 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	FAM221B	A6H8Z2	402 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	PGRMC1	O00264	195 aa	Known RBP	13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	MFSD11	O43934	449 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	MAP3K6	O95382	1288 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	FTH1P19	P0C7X4	201 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	GNS	P15586	552 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	TGM2	P21980	687 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	SERPINB6	P35237	376 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	TPMT	P51580	245 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	GBE1	Q04446	702 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	PAFAH1B3	Q15102	231 aa	Known RBP	13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	C6orf118	Q5T5N4	469 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	RNF219	Q5W0B1	726 aa	Predicted RBP	13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	ZNF354C	Q86Y25	554 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	APCDD1	Q8J025	514 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	NPW	Q8N729	165 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	OR2T3	Q8NH03	318 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	MAIP1	Q8WWC4	291 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	RETREG1	Q9H6L5	497 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	SAE1	Q9UBE0	346 aa	Predicted RBP	13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	ZNF212	Q9UDV6	495 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	PCDHB9	Q9Y5E1	797 aa		13.31	□□□□□ -0.28
NR1H3-223	ENST00000486991	APOC4-APOC2	K7ER74	178 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	DFFA	O00273	331 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	RAMP2	O60895	175 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	TRIM16	O95361	564 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	APOC2	P02655	101 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	PECAM1	P16284	738 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	MZF1	P28698	734 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	NNMT	P40261	264 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	PAFAH1B1	P43034	410 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	NUMB	P49757	651 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	PLK1	P53350	603 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	ZBTB16	Q05516	673 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	KLF1	Q13351	362 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	POLD3	Q15054	466 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	ZNF423	Q2M1K9	1284 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	SETD3	Q86TU7	594 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	CREG2	Q8IUH2	290 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	UMODL1-AS1	Q8N2C9	162 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	LZTR1	Q8N653	840 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	KDM1B	Q8NB78	822 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	CADM4	Q8NFZ8	388 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	ACTRT1	Q8TDG2	376 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	SETD7	Q8WTS6	366 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	DNASE2B	Q8WZ79	361 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	P3H4	Q92791	437 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	NAP1L3	Q99457	506 aa	Predicted RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	FAM118B	Q9BPY3	351 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	KLC2	Q9H0B6	622 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	MUC3B	Q9H195	1237 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	PCED1A	Q9H1Q7	454 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	EIF2B4	Q9UI10	523 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	ERVW-1	Q9UQF0	538 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	TBC1D30	Q9Y2I9	924 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	OR51B4	Q9Y5P0	310 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991	LOC400499	M0QZD8	3231 aa		13.3	□□□□□ -0.28
NR1H3-223	ENST00000486991		A0A1B0GTW7	788 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991		A0A1B0GVT2	93 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	ILVBL	A1L0T0	632 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	GOLGA8CP	A6NN73	597 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	METTL12	A8MUP2	240 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	C10orf142	B7Z368	130 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	RASA4B	C9J798	803 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	RASA4	O43374	803 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	RNASEH1	O60930	286 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	CBFA2T3	O75081	653 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	STK19	P49842	368 aa	Predicted RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	NDST2	P52849	883 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	RPS14	P62263	151 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	OTUD4	Q01804	1114 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	GNA12	Q03113	381 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLC10A2	Q12908	348 aa	Predicted RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLC14A1	Q13336	389 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLC12A1	Q13621	1099 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	PROSER1	Q86XN7	944 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	ARHGAP12	Q8IWW6	846 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	TP53INP2	Q8IXH6	220 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms