RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PSTPIP1O43586 416 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 TNNT1P13805 278 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 NUDT1P36639 197 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 MAPK8P45983 427 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 GRIA4P48058 902 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 VAV2P52735 878 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 ATXN3P54252 364 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-207ENST00000486572 SLC10A7Q0GE19 358 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 LBRQ14739 615 aaKnown RBP18.44■□□□□ 0.54
COL1A1-207ENST00000486572 GRM3Q14832 879 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 TEAD4Q15561 434 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 ODF2Q5BJF6 829 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 PQLC3Q8N755 202 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 CALR3Q96L12 384 aaKnown RBP18.44■□□□□ 0.54
COL1A1-207ENST00000486572 RNF157Q96PX1 679 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 PSKH2Q96QS6 385 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 GTPBP2Q9BX10 602 aaKnown RBP18.44■□□□□ 0.54
COL1A1-207ENST00000486572 ZDHHC5Q9C0B5 715 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 GOLPH3Q9H4A6 298 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 EBF2Q9HAK2 575 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 PI4KAP42356 2102 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 C3orf70A6NLC5 250 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-207ENST00000486572 C4orf47A7E2U8 309 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 INSIG1O15503 277 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 RNGTTO60942 597 aaKnown RBP18.43■□□□□ 0.54
COL1A1-207ENST00000486572 PEX11BO96011 259 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 MAT2AP31153 395 aaKnown RBP18.43■□□□□ 0.54
COL1A1-207ENST00000486572 RGRP47804 291 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 CSNK1DP48730 415 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 RENBPP51606 427 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 RACK1P63244 317 aaKnown RBP18.43■□□□□ 0.54
COL1A1-207ENST00000486572 GALNT2Q10471 571 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 GRIK2Q13002 908 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 ZNF235Q14590 738 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 SETMARQ53H47 684 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-207ENST00000486572 KIAA1328Q86T90 577 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 PRPF39Q86UA1 669 aaKnown RBP18.43■□□□□ 0.54
COL1A1-207ENST00000486572 TPCN2Q8NHX9 752 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 NSMCE1Q8WV22 266 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 RAB7BQ96AH8 199 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 SLC6A18Q96N87 628 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 TUBGCP5Q96RT8 1024 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 SALL4Q9UJQ4 1053 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 PLXNA2O75051 1894 aa18.43■□□□□ 0.54
COL1A1-207ENST00000486572 CACNA1EQ15878 2313 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 A0A1W2PQU0 124 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 MUSKO15146 869 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 PJA2O43164 708 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 AP1G1O43747 822 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 PCDH8O95206 1070 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 PIGNO95427 931 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 HSPA9P38646 679 aaKnown RBP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 GARSP41250 739 aaKnown RBP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 ABL2P42684 1182 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 CSNK1EP49674 416 aaKnown RBP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 GBE1Q04446 702 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 NSUN2Q08J23 767 aaKnown RBP eCLIP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 NAPEPLDQ6IQ20 393 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 ADAT2Q7Z6V5 191 aaKnown RBP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 DAAM2Q86T65 1068 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 SRLQ86TD4 932 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 HORMAD1Q86X24 394 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 BBS5Q8N3I7 341 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 TXLNBQ8N3L3 684 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 MINDY1Q8N5J2 469 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 RNF25Q96BH1 459 aaPredicted RBP18.42■□□□□ 0.54
COL1A1-207ENST00000486572 SERAC1Q96JX3 654 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 LACRTQ9GZZ8 138 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 AASDHPPTQ9NRN7 309 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 DKK3Q9UBP4 350 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 DMTF1Q9Y222 760 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 FADS3Q9Y5Q0 445 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 DUSP10Q9Y6W6 482 aa18.42■□□□□ 0.54
COL1A1-207ENST00000486572 LAMA1P25391 3075 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 A0A1B0GVT2 93 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 MAP3K6O95382 1288 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 MX2P20592 715 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 SERPINA4P29622 427 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 NAP1L1P55209 391 aaKnown RBP18.41■□□□□ 0.54
COL1A1-207ENST00000486572 AP1S1P61966 158 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 MARC1Q5VT66 337 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 SLC9A4Q6AI14 798 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 KIAA1161Q6NSJ0 714 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 TIGD7Q6NT04 549 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-207ENST00000486572 LAYNQ6UX15 382 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 PLD5Q8N7P1 536 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 HCAR2Q8TDS4 363 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 ZNF641Q96N77 438 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-207ENST00000486572 ZNF830Q96NB3 372 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-207ENST00000486572 DESI2Q9BSY9 194 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 MAK16Q9BXY0 300 aaKnown RBP18.41■□□□□ 0.54
COL1A1-207ENST00000486572 ATP13A3Q9H7F0 1226 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL1A1-207ENST00000486572 ADAMTS9Q9P2N4 1935 aa18.41■□□□□ 0.54
COL1A1-207ENST00000486572 TSPAN11A1L157 253 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 NEMP1O14524 444 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 APOL1O14791 398 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 VILLO15195 856 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms