RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 F5H423 210 aaPredicted RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 SMAD6O43541 496 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 GFRA3O60609 400 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 MT-CYBP00156 380 aaPredicted RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 APRTP07741 180 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 ADRA1AP35348 466 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 GRIA1P42261 906 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 GEMIN4P57678 1058 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 CDK16Q00536 496 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 ZNF235Q14590 738 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 PTPRNQ16849 979 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 GRAMD4Q6IC98 578 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 AGGF1Q8N302 714 aaeCLIP11.47□□□□□ -0.57
SND1-212ENST00000485871 ZCCHC9Q8N567 271 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 SH2D3CQ8N5H7 860 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 PDCD7Q8N8D1 485 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 TERB1Q8NA31 727 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 PRSS33Q8NF86 280 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 TTC8Q8TAM2 541 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 EZH1Q92800 747 aaPredicted RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 ISG20Q96AZ6 181 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 ATP6V1G3Q96LB4 118 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 NUDCD1Q96RS6 583 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 WDR83Q9BRX9 315 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 POLR1EQ9GZS1 481 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 STMN4Q9H169 189 aaPredicted RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 BRD9Q9H8M2 597 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 DEC1Q9P2X7 70 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 LIMD1Q9UGP4 676 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 ERVW-1Q9UQF0 538 aa11.47□□□□□ -0.57
SND1-212ENST00000485871 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
SND1-212ENST00000485871 TTC24A2A3L6 582 aaPredicted RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 ANTXRLA6NF34 631 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SRRM3A6NNA2 597 aaPredicted RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 ERI2A8K979 691 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 ATP9BO43861 1147 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 ANXA9O76027 345 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 ASLP04424 464 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 ASGR2P07307 311 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 IVLP07476 585 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SRPRAP08240 638 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 SOX9P48436 509 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 LMAN1P49257 510 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 PMS2P54278 862 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 GEMP55040 296 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 ECT2LQ008S8 904 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 KDSRQ06136 332 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
SND1-212ENST00000485871 MPP3Q13368 585 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 OLIG2Q13516 323 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 MSS51Q4VC12 460 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 FNBP1LQ5T0N5 605 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SYCP2LQ5T4T6 812 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 IER5LQ5T953 404 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 DENND2CQ68D51 928 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 C22orf39Q6P5X5 142 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 NCEH1Q6PIU2 408 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 TXNDC11Q6PKC3 985 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 TRMT10CQ7L0Y3 403 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 CAND1Q86VP6 1230 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 RELL1Q8IUW5 271 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 BBS5Q8N3I7 341 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 FRS2Q8WU20 508 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SORCS1Q8WY21 1168 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 DNASE1L2Q92874 299 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 EXOC2Q96KP1 924 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 MRGPRX2Q96LB1 330 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SERPINB12Q96P63 405 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 PPP1R2P1Q96PQ5 205 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 RBM15Q96T37 977 aaKnown RBP eCLIP11.46□□□□□ -0.57
SND1-212ENST00000485871 SEMA3CQ99985 751 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 TMEM109Q9BVC6 243 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 CEP44Q9C0F1 390 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 TMBIM4Q9HC24 238 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 FBRSL1Q9HCM7 1045 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 CASS4Q9NQ75 786 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 VPS45Q9NRW7 570 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 UBP1Q9NZI7 540 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 MUTYHQ9UIF7 546 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SLCO3A1Q9UIG8 710 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 SLC25A13Q9UJS0 675 aa11.46□□□□□ -0.57
SND1-212ENST00000485871 AAR2Q9Y312 384 aaKnown RBP11.46□□□□□ -0.57
SND1-212ENST00000485871 SCN8AQ9UQD0 1980 aa11.46□□□□□ -0.58
SND1-212ENST00000485871 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 SPECC1L-ADORA2AF8WAN1 911 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 GOLGA8MH3BSY2 632 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 INSIG1O15503 277 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 PSMD3O43242 534 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 NARSO43776 548 aaKnown RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 SHOX2O60902 331 aaPredicted RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 DLDP09622 509 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms