RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 FKBP15Q5T1M5 1219 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 FAM72AQ5TYM5 149 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 CDKAL1Q5VV42 579 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 FAM72DQ6L9T8 149 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 RETSATQ6NUM9 610 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 IQCHQ86VS3 1027 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 FAM72BQ86X60 149 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 LSMEM2Q8N112 164 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 RYBPQ8N488 228 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-215ENST00000485550 OR13H1Q8NG92 308 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 OR6K2Q8NGY2 324 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 SNRNP27Q8WVK2 155 aaKnown RBP10.77□□□□□ -0.69
HMGN1-215ENST00000485550 DEPDC7Q96QD5 511 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 HEPHQ9BQS7 1158 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 CALN1Q9BXU9 219 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 TM6SF2Q9BZW4 377 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 OSBPL2Q9H1P3 480 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 ERVMER34-1Q9H9K5 563 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 POLR1BQ9H9Y6 1135 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 ASCL3Q9NQ33 180 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 SEPT11Q9NVA2 429 aaKnown RBP10.77□□□□□ -0.69
HMGN1-215ENST00000485550 UCKL1Q9NWZ5 548 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
HMGN1-215ENST00000485550 C2CD4BA6NLJ0 364 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 BHMG1C9JSJ3 638 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 K7ENP7 123 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 FFAR2O15552 330 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 OPA1O60313 960 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 DXOO77932 396 aaKnown RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 CD160O95971 181 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 PAK4O96013 591 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 STAT1P42224 750 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 LSSP48449 732 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 SERPINH1P50454 418 aaKnown RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 CCNHP51946 323 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 JAM2P57087 298 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 ERVPABLB-1P60509 514 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 SLC20A2Q08357 652 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 OVGP1Q12889 678 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 C3orf38Q5JPI3 329 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 CDCP2Q5VXM1 449 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 NEK5Q6P3R8 708 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 INO80CQ6PI98 192 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 ARCQ7LC44 396 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 ZNF354CQ86Y25 554 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 SLC25A45Q8N413 288 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 NETO2Q8NC67 525 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 FAM172AQ8WUF8 416 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 PPP1R16AQ96I34 528 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 HDAC8Q9BY41 377 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 DPH1Q9BZG8 443 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 ZDHHC6Q9H6R6 413 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 WDR70Q9NW82 654 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 TMEM51Q9NW97 253 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 ADAM22Q9P0K1 906 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 HECAQ9UBI9 543 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 PPARGC1AQ9UBK2 798 aaKnown RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 SPTAN1Q13813 2472 aaKnown RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 UBR5O95071 2799 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-215ENST00000485550 UNC13CQ8NB66 2214 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 SCN8AQ9UQD0 1980 aa10.76□□□□□ -0.69
HMGN1-215ENST00000485550 RAD51BO15315 384 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 LRIG2O94898 1065 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 KRT3P12035 628 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 UNGP13051 313 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 ADRB3P13945 408 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 CDK11BP21127 795 aaKnown RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 HNRNPA2B1P22626 353 aaKnown RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 DGKAP23743 735 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 L1CAMP32004 1257 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 NSFP46459 744 aaKnown RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 NEK3P51956 506 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 HDAC4P56524 1084 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 PTP4A2Q12974 167 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 FGL2Q14314 439 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 ZSCAN23Q3MJ62 389 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 HS1BP3Q53T59 392 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 SCYL2Q6P3W7 929 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 WDR59Q6PJI9 974 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 ZNF783Q6ZMS7 281 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 CCDC81Q6ZN84 652 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 GCNT7Q6ZNI0 430 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 Q6ZSR6 202 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 PARS2Q7L3T8 475 aaKnown RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 NLRP14Q86W24 1093 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 PYROXD2Q8N2H3 581 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 PCDH20Q8N6Y1 951 aaKnown RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 EXD3Q8N9H8 876 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 NEK11Q8NG66 645 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 ARHGEF2Q92974 986 aaKnown RBP10.75□□□□□ -0.69
HMGN1-215ENST00000485550 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms