RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 CAMKK1Q8N5S9 505 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 PCDH20Q8N6Y1 951 aaKnown RBP12.41□□□□□ -0.42
TRA2B-213ENST00000485530 KDF1Q8NAX2 398 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-213ENST00000485530 OR2T3Q8NH03 318 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 HMGB4Q8WW32 186 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 C1orf54Q8WWF1 131 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 CASKIN2Q8WXE0 1202 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-213ENST00000485530 PBKQ96KB5 322 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 PSKH2Q96QS6 385 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 IL12RB2Q99665 862 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.426e-18■■■■□ 24.2
TRA2B-213ENST00000485530 HECAQ9UBI9 543 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-213ENST00000485530 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-213ENST00000485530 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
TRA2B-213ENST00000485530 LAMA1P25391 3075 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 PLK4O00444 970 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 AXIN1O15169 862 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 CR2P20023 1033 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 RBL1P28749 1068 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 CHRNA3P32297 505 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 CCNHP51946 323 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 EIF3EP60228 445 aaKnown RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 MAXP61244 160 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 ZNF33AQ06730 810 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 NSUN2Q08J23 767 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 XRCC4Q13426 336 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 RFTN1Q14699 578 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 E2F5Q15329 346 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 SEL1L2Q5TEA6 688 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 MARC1Q5VT66 337 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 ANO7Q6IWH7 933 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 WDR5BQ86VZ2 330 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 CREG2Q8IUH2 290 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 PRELID2Q8N945 189 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 TSTD1Q8NFU3 115 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 OR2AP1Q8NGE2 309 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 ARRDC2Q8TBH0 407 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 TFB1MQ8WVM0 346 aaKnown RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 QKIQ96PU8 341 aaKnown RBP eCLIP12.4□□□□□ -0.422e-8■■□□□ 11.6
TRA2B-213ENST00000485530 NAPGQ99747 312 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 POLMQ9NP87 494 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 NT5MQ9NPB1 228 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 SERGEFQ9UGK8 458 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 DNPEPQ9ULA0 475 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-213ENST00000485530 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 ATP8A1Q9Y2Q0 1164 aa12.4□□□□□ -0.42
TRA2B-213ENST00000485530 BCLAF3A2AJT9 711 aaKnown RBP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 H7C0C1 242 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 LIASO43766 372 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 EPN2O95208 641 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 APBB3O95704 486 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 POP4O95707 220 aaKnown RBP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 GSRP00390 522 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 HLA-DQB2P05538 268 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 MMP2P08253 660 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 RBP3P10745 1247 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 PTPN3P26045 913 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 SLC8A1P32418 973 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 CD68P34810 354 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 MMP13P45452 471 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 ATP5OP48047 213 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 RENBPP51606 427 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 RHOAP61586 193 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 SNX1Q13596 522 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 ELAVL3Q14576 367 aaKnown RBP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 STARD3Q14849 445 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 OASLQ15646 514 aaKnown RBP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 POM121L1PQ3SYA9 428 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 CCDC181Q5TID7 509 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 SRLQ86TD4 932 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRA2B-213ENST00000485530 AADATQ8N5Z0 425 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 LOXL4Q96JB6 756 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 HEPHQ9BQS7 1158 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 NOD2Q9HC29 1040 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 ITM2CQ9NQX7 267 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
TRA2B-213ENST00000485530 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
TRA2B-213ENST00000485530 HACD1B0YJ81 288 aa12.38□□□□□ -0.43
TRA2B-213ENST00000485530 KRIT1O00522 736 aa12.38□□□□□ -0.43
TRA2B-213ENST00000485530 CES2O00748 559 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms