RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CD86P42081 329 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 POLGP54098 1239 aaPredicted RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 VCPP55072 806 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 BCAR1P56945 870 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 PSMC5P62195 406 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 SLC25A3Q00325 362 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 FMO1Q01740 532 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 DRP2Q13474 957 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 TIGD6Q17RP2 521 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 C5orf22Q49AR2 442 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 RARS2Q5T160 578 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 KAZNQ674X7 775 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 PLA2G4FQ68DD2 849 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 GALNT17Q6IS24 598 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 ACAD10Q6JQN1 1059 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 CNSTQ6PJW8 725 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 BTN2A1Q7KYR7 527 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 RUFY3Q7L099 469 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 VPS52Q8N1B4 723 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 HIPK4Q8NE63 616 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 RABGGTAQ92696 567 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 LPPQ93052 612 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 ZUFSPQ96AP4 578 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 CCDC43Q96MW1 224 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 TSGA13Q96PP4 275 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 ANP32EQ9BTT0 268 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 EDEM3Q9BZQ6 932 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 PAIP1Q9H074 479 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 OR10A4Q9H209 315 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 S1PR5Q9H228 398 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 POMKQ9H5K3 350 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 SFXN1Q9H9B4 322 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 TBC1D13Q9NVG8 400 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 SUCLA2Q9P2R7 463 aaPredicted RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 MYO1AQ9UBC5 1043 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 STK39Q9UEW8 545 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 DDX25Q9UHL0 483 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 LIMCH1Q9UPQ0 1083 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 RRP15Q9Y3B9 282 aaKnown RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 CYP46A1Q9Y6A2 500 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 ZFP37Q9Y6Q3 630 aaPredicted RBP6.88□□□□□ -1.31
CLK1-212ENST00000482590 FAM186AA6NE01 2351 aa6.88□□□□□ -1.31
CLK1-212ENST00000482590 CNTNAP2Q9UHC6 1331 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 IGKV6-21A0A0C4DH24 114 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 SLC12A8A0AV02 714 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 H0Y626 953 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 TBCAO75347 108 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 FAM155BO75949 473 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 CDKL5O76039 1030 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 ERLIN2O94905 339 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 CXCL14O95715 111 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 PEX11BO96011 259 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 URODP06132 367 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 THEGLP0DJG4 465 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 CTSAP10619 480 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 GCFC2P16383 781 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 EPCAMP16422 314 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 QARSP47897 775 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 CLCN2P51788 898 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 IFI35P80217 286 aaPredicted RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 TCF15Q12870 199 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 E2F5Q15329 346 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 TSTQ16762 297 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 UGT8Q16880 541 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLK1-212ENST00000482590 LETM2Q2VYF4 491 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 NOMO2Q5JPE7 1267 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 MBNL2Q5VZF2 373 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 FAM47EQ6ZV65 393 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 NEK8Q86SG6 692 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 TMEM173Q86WV6 379 aaPredicted RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 ZZZ3Q8IYH5 903 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 UBALD2Q8IYN6 164 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 TXLNBQ8N3L3 684 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 MRPL43Q8N983 215 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 ATP11CQ8NB49 1132 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 GOT1L1Q8NHS2 421 aaPredicted RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 ETNPPLQ8TBG4 499 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 PSPC1Q8WXF1 523 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 AUTS2Q8WXX7 1259 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 ATOH1Q92858 354 aaPredicted RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 IGSF21Q96ID5 467 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 CEP170P1Q96L14 293 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 PPP1R9BQ96SB3 815 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 MFSD1Q9H3U5 465 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 NRDE2Q9H7Z3 1164 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 TM7SF3Q9NS93 570 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 AGPAT5Q9NUQ2 364 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 PIH1D1Q9NWS0 290 aaKnown RBP6.87□□□□□ -1.31
CLK1-212ENST00000482590 CDH22Q9UJ99 828 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 SNX8Q9Y5X2 465 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 IKBKGQ9Y6K9 419 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 DMDP11532 3685 aa6.87□□□□□ -1.31
CLK1-212ENST00000482590 ZFHX2Q9C0A1 2572 aaPredicted RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 CYP3A7-CYP3A51PA0A087WV96 503 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 A0A0B4J269 797 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 A0A1W2PRX2 142 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms