RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 RRM1P23921 792 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 FCARP24071 287 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 GDI1P31150 447 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 RDXP35241 583 aaKnown RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 ARHGAP25P42331 645 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 GALCP54803 685 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 PIGHQ14442 188 aaPredicted RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 TANGO2Q6ICL3 276 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 PARM1Q6UWI2 310 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 MIB1Q86YT6 1006 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 CCDC117Q8IWD4 279 aaPredicted RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 CPXM2Q8N436 756 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC44A3Q8N4M1 653 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 NETO2Q8NC67 525 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 CCDC26Q8TAB7 109 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 DQX1Q8TE96 717 aaKnown RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 RXFP2Q8WXD0 754 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 NT5C3BQ969T7 300 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 BTN2A3PQ96KV6 586 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 ZSWIM3Q96MP5 696 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 MCEEQ96PE7 176 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 NPY6RQ99463 290 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 RETREG1Q9H6L5 497 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 WDCPQ9H6R7 721 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 C8orf33Q9H7E9 229 aaPredicted RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC2A4RGQ9NR83 387 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 DDIT4Q9NX09 232 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 OSER1Q9NX31 292 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 DUS2Q9NX74 493 aaKnown RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 MYO1AQ9UBC5 1043 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 FBLN5Q9UBX5 448 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 SFMBT1Q9UHJ3 866 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 NAALADL1Q9UQQ1 740 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 KMT2EQ8IZD2 1858 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 A0A0A6YYK5 440 aaPredicted RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 TCRBV5S1A1TA0A578 114 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 C2CD4BA6NLJ0 364 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 BTNL10A8MVZ5 291 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 MYO1FO00160 1098 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 MAN2B1O00754 1011 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 GRAP2O75791 330 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 STC2O76061 302 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 KCNH1O95259 989 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 PRAMEF12O95522 483 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 IGLV3-27P01718 113 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 CYP1A2P05177 515 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 FYNP06241 537 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 IRF1P10914 325 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 CORO1AP31146 461 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 ZNF135P52742 658 aaPredicted RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 PRR5P85299 388 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 GAD2Q05329 585 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 RUNX3Q13761 415 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 ITPRIPL2Q3MIP1 535 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 MPPE1Q53F39 396 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SYPL2Q5VXT5 272 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 KIAA1328Q86T90 577 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 TAC4Q86UU9 113 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 LRRC8AQ8IWT6 810 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SUGP1Q8IWZ8 645 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 LZTR1Q8N653 840 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 OLIG1Q8TAK6 271 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 NDRG1Q92597 394 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC39A13Q96H72 371 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 PDLIM2Q96JY6 352 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 XPO6Q96QU8 1125 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC22A12Q96S37 553 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 PPP1R9BQ96SB3 815 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 KXD1Q9BQD3 176 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 CNPY3Q9BT09 278 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 NUP85Q9BW27 656 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 THAP2Q9H0W7 228 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 ZCCHC4Q9H5U6 513 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 DONSONQ9NYP3 566 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 TAS2R14Q9NYV8 317 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 CTTNBP2NLQ9P2B4 639 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 CFAP97Q9P2B7 532 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 WNT16Q9UBV4 365 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 NENFQ9UMX5 172 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 MRPS17Q9Y2R5 130 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 PCDHA13Q9Y5I0 950 aa6.92□□□□□ -1.3
CTNNB1-213ENST00000482042 ZC3H12DA2A288 527 aaKnown RBP6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 TMEM191CA6NGB0 347 aa6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 KCNU1A8MYU2 1149 aa6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 MDM4O15151 490 aa6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 NCAM2O15394 837 aa6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 CCP110O43303 1012 aa6.91□□□□□ -1.3
CTNNB1-213ENST00000482042 KRT86O43790 486 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms