RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PEX26Q7Z412 305 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 PLD5Q8N7P1 536 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 LRRC57Q8N9N7 239 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 TSEN2Q8NCE0 465 aaKnown RBP20.76■□□□□ 0.91
VARS-224ENST00000479051 RAB7BQ96AH8 199 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 BIRC7Q96CA5 298 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 TUBGCP5Q96RT8 1024 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 NUSAP1Q9BXS6 441 aaKnown RBP20.76■□□□□ 0.91
VARS-224ENST00000479051 TRIM10Q9UDY6 481 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 PCDHA3Q9Y5H8 950 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 HEY1Q9Y5J3 304 aa20.76■□□□□ 0.91
VARS-224ENST00000479051 PTPRZ1P23471 2315 aaPredicted RBP20.75■□□□□ 0.91
VARS-224ENST00000479051 PRR5-ARHGAP8B1AHC4 643 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 PTMAP06454 111 aaKnown RBP20.75■□□□□ 0.91
VARS-224ENST00000479051 CCNCP24863 283 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 CTNNA2P26232 953 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 MAOBP27338 520 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 COPS2P61201 443 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 DYNLT1P63172 113 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 CCZ1BP86790 482 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 CCZ1P86791 482 aaPredicted RBP20.75■□□□□ 0.91
VARS-224ENST00000479051 PDK1Q15118 436 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 AASDHQ4L235 1098 aaPredicted RBP20.75■□□□□ 0.91
VARS-224ENST00000479051 TRIM61Q5EBN2 209 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 NEK5Q6P3R8 708 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 SRLQ86TD4 932 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 CCNYQ8ND76 341 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 KRT35Q92764 455 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 FATE1Q969F0 183 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 HDAC11Q96DB2 347 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 KLHL32Q96NJ5 620 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 TSGA13Q96PP4 275 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 ATP13A3Q9H7F0 1226 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 TMEM74BQ9NUR3 256 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 DTLQ9NZJ0 730 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 EIF2B4Q9UI10 523 aaKnown RBP20.75■□□□□ 0.91
VARS-224ENST00000479051 TNRC6BQ9UPQ9 1833 aaKnown RBP20.75■□□□□ 0.91
VARS-224ENST00000479051 NUMA1Q14980 2115 aa20.75■□□□□ 0.91
VARS-224ENST00000479051 A0A1B0GTW7 788 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 MIF4GDA9UHW6 222 aaKnown RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 PPP1R12AO14974 1030 aaPredicted RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 MAP3K6O95382 1288 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 CFIP05156 583 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 ADRB3P13945 408 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 TGM1P22735 817 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 XPAP23025 273 aaPredicted RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 CD27P26842 260 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 SERPINA4P29622 427 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 NUDT1P36639 197 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 MARCKSL1P49006 195 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 NR2C2P49116 596 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 SCNN1BP51168 640 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 RWDD2BP57060 319 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 AP1S1P61966 158 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 HNRNPDQ14103 355 aaKnown RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 PPP2R5EQ16537 467 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 TAZQ16635 292 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 KAZNQ674X7 775 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 PARS2Q7L3T8 475 aaKnown RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 PRPF39Q86UA1 669 aaKnown RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 UBL4BQ8N7F7 174 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 PAF1Q8N7H5 531 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 HCAR2Q8TDS4 363 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 UBE2Q2Q8WVN8 375 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 ZNF641Q96N77 438 aaPredicted RBP20.74■□□□□ 0.91
VARS-224ENST00000479051 BRD8Q9H0E9 1235 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 DKK3Q9UBP4 350 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 GUCA1BQ9UMX6 200 aa20.74■□□□□ 0.91
VARS-224ENST00000479051 DMDP11532 3685 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.73■□□□□ 0.91
VARS-224ENST00000479051 C16orf96A6NNT2 1141 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 MATN3O15232 486 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 BCAT2O15382 392 aaPredicted RBP20.73■□□□□ 0.91
VARS-224ENST00000479051 CST8O60676 142 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 PEX11BO96011 259 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 TGM2P21980 687 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 ARHGAP8P85298 464 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 SF3A2Q15428 464 aaKnown RBP20.73■□□□□ 0.91
VARS-224ENST00000479051 RALGPS1Q5JS13 557 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 SLC23A3Q6PIS1 610 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 NT5DC3Q86UY8 548 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 TRIM69Q86WT6 500 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 CCDC13Q8IYE1 715 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 ZCCHC9Q8N567 271 aaKnown RBP20.73■□□□□ 0.91
VARS-224ENST00000479051 MGME1Q9BQP7 344 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 SMOC1Q9H4F8 434 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 SUV39H2Q9H5I1 410 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 SCUBE2Q9NQ36 999 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 AMACRQ9UHK6 382 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 SLC6A14Q9UN76 642 aa20.73■□□□□ 0.91
VARS-224ENST00000479051 hCG_1818297A0A087WSY0 165 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 A0A0U1RQJ8 604 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 A0A1W2PPC4 97 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 RNF103O00237 685 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 NEMP1O14524 444 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 INSIG1O15503 277 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 AP1G1O43747 822 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 PCDH8O95206 1070 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 IGHV4-34P06331 123 aa20.72■□□□□ 0.91
VARS-224ENST00000479051 SERPINF2P08697 491 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms