RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 DYNLT1P63172 113 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CYP27A1Q02318 531 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MFSD10Q14728 455 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TCTE3Q8IZS6 198 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TUT1Q9H6E5 874 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 DDX18Q9NVP1 670 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 RGS17Q9UGC6 210 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 DNMT3AQ9Y6K1 912 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 H3BRB1 525 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 OR1I1O60431 355 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CCNKO75909 580 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 AGTP01019 485 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 FASP25445 335 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SLC6A6P31641 620 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 UGT2B15P54855 530 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 DGKDQ16760 1214 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CLEC4GQ6UXB4 293 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PLEKHG7Q6ZR37 379 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 USP45Q70EL2 814 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SLITRK4Q8IW52 837 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 GUF1Q8N442 669 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 ZNF565Q8N9K5 539 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 GOLM1Q8NBJ4 401 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 FBXW5Q969U6 566 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RADILQ96JH8 1075 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 HERC2P3Q9BVR0 1158 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RAB11FIP5Q9BXF6 653 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MTMR6Q9Y217 621 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PPP2R2CQ9Y2T4 447 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 FLT4P35916 1363 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 A0A1W2PQ67 120 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 H3BN98 237 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MFSD11O43934 449 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 AP2A1O95782 977 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TFRCP02786 760 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 ASLP04424 464 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TACSTD2P09758 323 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CYP11B2P19099 503 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MARK3P27448 753 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 DSG3P32926 999 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 DUSP4Q13115 394 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 UNC5CLQ8IV45 518 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CFAP206Q8IYR0 622 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MCOLN2Q8IZK6 566 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 OR7G1Q8NGA0 311 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MOAP1Q96BY2 351 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 KCTD14Q9BQ13 255 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 REEP1Q9H902 201 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MOV10Q9HCE1 1003 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 SOHLH2Q9NX45 425 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CNOT11Q9UKZ1 510 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 NR2E1Q9Y466 385 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CFAP43Q8NDM7 1665 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CASZ1Q86V15 1759 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 AFF2P51816 1311 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 KDM6AO15550 1401 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 ANKRD34BA5PLL1 514 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 USP27XA6NNY8 438 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 C1QTNF3-AMACRE9PGA6 284 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 HSPA12AO43301 675 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RFC5P40937 340 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ADAM17P78536 824 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 IFI35P80217 286 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 PPARAQ07869 468 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CA9Q16790 459 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TPGS1Q6ZTW0 290 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CEP68Q76N32 757 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 DGLUCYQ7Z3D6 616 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 C11orf96Q7Z7L8 435 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PDPRQ8NCN5 879 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ZNF507Q8TCN5 953 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MAFIPQ8WZ33 124 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ACDQ96AP0 544 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SLC22A18Q96BI1 424 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TMA16Q96EY4 203 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 ZNF341Q9BYN7 854 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TMEM39AQ9NV64 488 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CALML5Q9NZT1 146 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 A0A0G2JN53 185 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 HAS3O00219 553 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 DNAJB6O75190 326 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SASH1O94885 1247 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 STAG3L2P0CL84 134 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 HLA-DMAP28067 261 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CHATP28329 748 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CDK16Q00536 496 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PRKCEQ02156 737 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MERTKQ12866 999 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 LONRF1Q17RB8 773 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TBRG1Q3YBR2 411 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RALGPS1Q5JS13 557 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SYDE2Q5VT97 1194 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TRIM40Q6P9F5 258 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PCSK9Q8NBP7 692 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 CD101Q93033 1021 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 EEF2KMTQ96G04 330 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SERPINB11Q96P15 392 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PCBD2Q9H0N5 130 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TDP1Q9NUW8 608 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 KBTBD4Q9NVX7 518 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms