RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 AKT2P31751 481 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 CASP14P31944 242 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 GKP32189 559 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 ABL2P42684 1182 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 RAD51Q06609 339 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 DPYSQ14117 519 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 ATXN7L2Q5T6C5 722 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-215ENST00000478473 SEL1L3Q68CR1 1132 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 ALKBH5Q6P6C2 394 aaKnown RBP23.76■■□□□ 1.39
C9orf3-215ENST00000478473 GDPD4Q6W3E5 623 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 LEKR1Q6ZMV7 388 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 LZTR1Q8N653 840 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 CPLX3Q8WVH0 158 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 TEKT4Q8WW24 435 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 ARHGEF26Q96DR7 871 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 KLHDC7BQ96G42 594 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 LENG8Q96PV6 779 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-215ENST00000478473 CWC15Q9P013 229 aaKnown RBP23.76■■□□□ 1.39
C9orf3-215ENST00000478473 ARHGAP42A6NI28 874 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 SLC31A1O15431 190 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 TNFSF14O43557 240 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 PRLRP16471 622 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 SPINK2P20155 84 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 CSNK1DP48730 415 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 SUOXP51687 545 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 FGL2Q14314 439 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 PRAMEF14Q5SWL7 426 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 RYBPQ8N488 228 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-215ENST00000478473 OR6K2Q8NGY2 324 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 DNAJC7Q99615 494 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.75■■□□□ 1.394e-6■■■□□ 18.4
C9orf3-215ENST00000478473 SLC17A9Q9BYT1 436 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 UBA2Q9UBT2 640 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-215ENST00000478473 IP6K2Q9UHH9 426 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 TRPM6Q9BX84 2022 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 USP24Q9UPU5 2620 aa23.75■■□□□ 1.39
C9orf3-215ENST00000478473 TSPAN11A1L157 253 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 J3KR12 359 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 UGT2B4P06133 528 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 PROS1P07225 676 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 PAPOLAP51003 745 aaKnown RBP23.74■■□□□ 1.39
C9orf3-215ENST00000478473 RHOAP61586 193 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 TRIM14Q14142 442 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 GRM3Q14832 879 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 SPECC1LQ69YQ0 1117 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 GCNT7Q6ZNI0 430 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 ZNF354CQ86Y25 554 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 DCP2Q8IU60 420 aaKnown RBP23.74■■□□□ 1.39
C9orf3-215ENST00000478473 CHCHD4Q8N4Q1 142 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 NPWQ8N729 165 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 FAM71BQ8TC56 605 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 IFT43Q96FT9 208 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 BMFQ96LC9 184 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 KLHL32Q96NJ5 620 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 KLF6Q99612 283 aaPredicted RBP23.74■■□□□ 1.39
C9orf3-215ENST00000478473 KLHL11Q9NVR0 708 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 KLK13Q9UKR3 277 aa23.74■■□□□ 1.39
C9orf3-215ENST00000478473 CBFA2T2O43439 604 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 ATXN1LP0C7T5 689 aaKnown RBP23.73■■□□□ 1.39
C9orf3-215ENST00000478473 IL9RQ01113 521 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 RFTN1Q14699 578 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-215ENST00000478473 ASTE1Q2TB18 679 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-215ENST00000478473 PPP6R3Q5H9R7 873 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-215ENST00000478473 UNQ6494/PRO21346Q6UXR6 183 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 POLNQ7Z5Q5 900 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 KDF1Q8NAX2 398 aaPredicted RBP23.73■■□□□ 1.39
C9orf3-215ENST00000478473 DENND6BQ8NEG7 585 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 ZWILCHQ9H900 591 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 CA5BQ9Y2D0 317 aa23.73■■□□□ 1.39
C9orf3-215ENST00000478473 ARID1BQ8NFD5 2236 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-215ENST00000478473 AKAP13Q12802 2813 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 DAPK3O43293 454 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 ITGAVP06756 1048 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 THEGLP0DJG4 465 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 RARAP10276 462 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 TCF4P15884 667 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 SLC25A11Q02978 314 aaKnown RBP23.72■■□□□ 1.39
C9orf3-215ENST00000478473 MAPK8IP2Q13387 824 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-215ENST00000478473 CCDC122Q5T0U0 273 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 KYAT3Q6YP21 454 aaKnown RBP23.72■■□□□ 1.39
C9orf3-215ENST00000478473 GATAD2AQ86YP4 633 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 OR8K1Q8NGG5 319 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 TSC1Q92574 1164 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 KLK6Q92876 244 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 CELF6Q96J87 481 aaKnown RBP23.72■■□□□ 1.39
C9orf3-215ENST00000478473 ZNF641Q96N77 438 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-215ENST00000478473 NUP85Q9BW27 656 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 PCDHGA1Q9Y5H4 931 aa23.72■■□□□ 1.39
C9orf3-215ENST00000478473 SSU72P8A0A1W2PR75 194 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 TMEM8BA6NDV4 472 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 A6NNZ2 444 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 H3BRJ5 948 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 PAK4O96013 591 aaPredicted RBP23.71■■□□□ 1.39
C9orf3-215ENST00000478473 TIMP2P16035 220 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 IL10RBQ08334 325 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 NSUN2Q08J23 767 aaKnown RBP eCLIP23.71■■□□□ 1.39
C9orf3-215ENST00000478473 OR13H1Q8NG92 308 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 ZNF599Q96NL3 588 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 TUBGCP5Q96RT8 1024 aa23.71■■□□□ 1.39
C9orf3-215ENST00000478473 TSPY26PQ9H489 355 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms