RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 FUT11Q495W5 492 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 INO80DQ53TQ3 878 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-206ENST00000477085 SIRPB2Q5JXA9 342 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 GET4Q7L5D6 327 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-206ENST00000477085 CCNJLQ8IV13 435 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 TRIB3Q96RU7 358 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 NAT9Q9BTE0 207 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 KIFC1Q9BW19 673 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 SOX13Q9UN79 622 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 FAM237BA0A1B0GVD1 139 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 A0A1W2PPM1 405 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 CCDC78A2IDD5 438 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 INSIG1O15503 277 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 PRLP01236 227 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 BMP1P13497 986 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 EML3Q32P44 896 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 PITRM1Q5JRX3 1037 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 KDM7AQ6ZMT4 941 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 PPM1NQ8N819 430 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 NAT16Q8N8M0 369 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 MYLIPQ8WY64 445 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 SMARCD2Q92925 531 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 TTC17Q96AE7 1141 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 VOPP1Q96AW1 172 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 ZFYVE19Q96K21 471 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 MARK1Q9P0L2 795 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 SAMD15Q9P1V8 674 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 PSMC3IPQ9P2W1 217 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-206ENST00000477085 FAM169AQ9Y6X4 670 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 UNC80Q8N2C7 3258 aa14.62□□□□□ -0.07
COL4A6-206ENST00000477085 MAGEB16A2A368 324 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 OTOL1A6NHN0 477 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 AP3B1O00203 1094 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 USP1O94782 785 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 POLBP06746 335 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 ERVK-10P10266 1014 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 MSH2P43246 934 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 DHCR24Q15392 516 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 PCID2Q5JVF3 399 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 SPANXN3Q5MJ09 141 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 ATXN7L2Q5T6C5 722 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 TMEM215Q68D42 235 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 PKN3Q6P5Z2 889 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 CCDC117Q8IWD4 279 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 BBS5Q8N3I7 341 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 RIBC1Q8N443 379 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 OSCP1Q8WVF1 389 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 PPP2R3CQ969Q6 453 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 ACDQ96AP0 544 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 ZNF669Q96BR6 464 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 OTUB2Q96DC9 234 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 RPL10LQ96L21 214 aaKnown RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 NUDCD1Q96RS6 583 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 C2orf49Q9BVC5 232 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 TTYH1Q9H313 450 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 KIF9Q9HAQ2 790 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 DUS2Q9NX74 493 aaKnown RBP14.61□□□□□ -0.07
COL4A6-206ENST00000477085 SLC2A6Q9UGQ3 507 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 MYOFQ9NZM1 2061 aa14.61□□□□□ -0.07
COL4A6-206ENST00000477085 HMX2A2RU54 273 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 TBX10O75333 385 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 CYP17A1P05093 508 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PDHA1P08559 390 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SERPINF2P08697 491 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 ARSAP15289 507 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 STK19P49842 368 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SERPINH1P50454 418 aaKnown RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PPP2R2AP63151 447 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 CDK18Q07002 472 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 NSUN2Q08J23 767 aaKnown RBP eCLIP14.6□□□□□ -0.073e-9■■■■■ 39.7
COL4A6-206ENST00000477085 MPP2Q14168 576 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 GALNT3Q14435 633 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 DGKKQ5KSL6 1271 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 TANGO2Q6ICL3 276 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 ESRP1Q6NXG1 681 aaKnown RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 NCEH1Q6PIU2 408 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 KIAA0907Q7Z7F0 614 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 ADIPOR2Q86V24 386 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 TRABD2AQ86V40 505 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 LRRC6Q86X45 466 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 CTAGE3PQ8IX95 158 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 MDM1Q8TC05 714 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 FEM1CQ96JP0 617 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PKNOX2Q96KN3 472 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SMIM14Q96QK8 99 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PPCSQ9HAB8 311 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 TRPV4Q9HBA0 871 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 SCUBE2Q9NQ36 999 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 GDE1Q9NZC3 331 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 GGA2Q9UJY4 613 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 CHKBQ9Y259 395 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 TCAF1Q9Y4C2 921 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PCDHGC4Q9Y5F7 938 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PSAT1Q9Y617 370 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 HEPACAM2A8MVW5 462 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 EPOP01588 193 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 PRKCGP05129 697 aa14.6□□□□□ -0.07
COL4A6-206ENST00000477085 F7P08709 466 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-206ENST00000477085 ARNTP27540 789 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms