RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TMEM114B3SHH9 223 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 C2P06681 752 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 CPA3P15088 417 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 NCALDP61601 193 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 NSUN2Q08J23 767 aaKnown RBP eCLIP21.99■■□□□ 1.11
CCM2-206ENST00000474617 TBCCQ15814 346 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 SPRED3Q2MJR0 410 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 NEPROQ6NW34 567 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 KLHL29Q96CT2 875 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 TSPAN17Q96FV3 270 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 RAB3IPQ96QF0 476 aaPredicted RBP21.99■■□□□ 1.11
CCM2-206ENST00000474617 MYLK2Q9H1R3 596 aa21.99■■□□□ 1.11
CCM2-206ENST00000474617 MRPL42Q9Y6G3 142 aaKnown RBP21.99■■□□□ 1.11
CCM2-206ENST00000474617 H3BNC9 293 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 GJB5O95377 273 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 GSRP00390 522 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 RHOCP08134 193 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 SLC6A4P31645 630 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 CLCN5P51795 746 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 DSC2Q02487 901 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 ACVR1Q04771 509 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 CNGA3Q16281 694 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 ESRP1Q6NXG1 681 aaKnown RBP21.98■■□□□ 1.11
CCM2-206ENST00000474617 RTL10Q7L3V2 364 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 DNAJB7Q7Z6W7 309 aaPredicted RBP21.98■■□□□ 1.11
CCM2-206ENST00000474617 DENND1CQ8IV53 801 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 KLHL5Q96PQ7 755 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 TMEM237Q96Q45 408 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 YME1L1Q96TA2 773 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 SEMA3CQ99985 751 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 ACE2Q9BYF1 805 aaPredicted RBP21.98■■□□□ 1.11
CCM2-206ENST00000474617 MFSD1Q9H3U5 465 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 SLC40A1Q9NP59 571 aa21.98■■□□□ 1.11
CCM2-206ENST00000474617 A0A0G2JND7 137 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 TRAFD1O14545 582 aaPredicted RBP21.97■■□□□ 1.11
CCM2-206ENST00000474617 CCDC22O60826 627 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 OLFM2O95897 454 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 RAG1P15918 1043 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 STMN1P16949 149 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 HOXD9P28356 352 aaPredicted RBP21.97■■□□□ 1.11
CCM2-206ENST00000474617 SLC26A3P40879 764 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 RAB10P61026 200 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 TWF1Q12792 350 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 SEPT6Q14141 434 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 USP10Q14694 798 aaKnown RBP21.97■■□□□ 1.11
CCM2-206ENST00000474617 KRT72Q14CN4 511 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 PCLAFQ15004 111 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 PCSK7Q16549 785 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 IL31Q6EBC2 164 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 ASRGL1Q7L266 308 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 MECRQ9BV79 373 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 CINPQ9BW66 212 aaPredicted RBP21.97■■□□□ 1.11
CCM2-206ENST00000474617 TMEM120AQ9BXJ8 343 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 LRMDAQ9H2I8 198 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 NMRAL1Q9HBL8 299 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 ARHGEF3Q9NR81 526 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 FBXO5Q9UKT4 447 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 AGO1Q9UL18 857 aaKnown RBP21.97■■□□□ 1.11
CCM2-206ENST00000474617 ACOT9Q9Y305 439 aa21.97■■□□□ 1.11
CCM2-206ENST00000474617 CXorf51AA0A1B0GTR3 108 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 AHSGP02765 367 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 FGF3P11487 239 aaPredicted RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 MYL4P12829 197 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 ARNTP27540 789 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 ACVRL1P37023 503 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 LEPRP48357 1165 aaKnown RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 ZBTB16Q05516 673 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 SF3A3Q12874 501 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCM2-206ENST00000474617 MSLNQ13421 630 aaPredicted RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 CCDC149Q6ZUS6 474 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 RAPH1Q70E73 1250 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 NECAB2Q7Z6G3 386 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 CLNKQ7Z7G1 428 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 HJURPQ8NCD3 748 aaPredicted RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 PIWIL2Q8TC59 973 aaKnown RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 STON2Q8WXE9 905 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 ZNF778Q96MU6 729 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 KCNK13Q9HB14 408 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 TRPC7Q9HCX4 862 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 IL1RAPL1Q9NZN1 696 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 TMEM216Q9P0N5 145 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 LNPEPQ9UIQ6 1025 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 DCTN4Q9UJW0 460 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 SLC39A10Q9ULF5 831 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 MIA3Q5JRA6 1907 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 LILRB3O75022 631 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 NDST3O95803 873 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 ATXN1LP0C7T5 689 aaKnown RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 CTSAP10619 480 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 RALBP11234 206 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 SLC12A2P55011 1212 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 DEFB103AP81534 67 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 GRM3Q14832 879 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 SIRPB2Q5JXA9 342 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 CMC1Q7Z7K0 106 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 CIR1Q86X95 450 aaPredicted RBP21.96■■□□□ 1.11
CCM2-206ENST00000474617 PGBD5Q8N414 524 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 OR6Y1Q8NGX8 325 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 RFWD2Q8NHY2 731 aa21.96■■□□□ 1.11
CCM2-206ENST00000474617 BRSK1Q8TDC3 778 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms