RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SCAIQ8N9R8 606 aa3.82□□□□□ -1.8
TMEM50B-208ENST00000474272 PCYOX1LQ8NBM8 494 aa3.82□□□□□ -1.8
TMEM50B-208ENST00000474272 TBC1D22AQ8WUA7 517 aa3.82□□□□□ -1.8
TMEM50B-208ENST00000474272 TAOK3Q9H2K8 898 aa3.82□□□□□ -1.8
TMEM50B-208ENST00000474272 CCDC196A0A1B0GTZ2 297 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 A0A1B0GUV1 79 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SRRM3A6NNA2 597 aaPredicted RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SMTNL1A8MU46 457 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 BTBD18B2RXH4 712 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 MSI1O43347 362 aaKnown RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 EPB41L2O43491 1005 aaKnown RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SOCS5O75159 536 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 NEURL1O76050 574 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 CD4P01730 458 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 KLKB1P03952 638 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 IFIT1P09914 478 aaKnown RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 ARSBP15848 533 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 PRKCHP24723 683 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 GGT5P36269 586 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 PTPN9P43378 593 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 EEF1A2Q05639 463 aaKnown RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 GOLGA8FQ08AF8 430 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 COASYQ13057 564 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 KDELC2Q7Z4H8 507 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 MON1AQ86VX9 555 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SETD9Q8NE22 299 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 RFWD2Q8NHY2 731 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 GABPB2Q8TAK5 448 aaPredicted RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 TMEM255BQ8WV15 326 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 RUFY2Q8WXA3 655 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 NCSTNQ92542 709 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 RNF125Q96EQ8 232 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 EYA3Q99504 573 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 WDR77Q9BQA1 342 aaPredicted RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 FUZQ9BT04 418 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SLC26A6Q9BXS9 759 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 UBA5Q9GZZ9 404 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 PAIP1Q9H074 479 aaKnown RBP3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 FZD10Q9ULW2 581 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SUFUQ9UMX1 484 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 ARHGAP26Q9UNA1 814 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 TNFSF13BQ9Y275 285 aa3.81□□□□□ -1.8
TMEM50B-208ENST00000474272 SCN5AQ14524 2016 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 PER2O15055 1255 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 HBP1O60381 514 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 MBD4O95243 580 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 TBX18O95935 607 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 PRSS2P07478 247 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 FCGR2AP12318 317 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 TNFAIP3P21580 790 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 TCEA1P23193 301 aaKnown RBP3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 ITGB8P26012 769 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 ABCD3P28288 659 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 ELF1P32519 619 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 STAT1P42224 750 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 TMPRSS3P57727 454 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 SELENOVP59797 346 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 GALNT3Q14435 633 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 NAA25Q14CX7 972 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 GPR68Q15743 365 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 BAK1Q16611 211 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 NFIL3Q16649 462 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 PRICKLE4Q2TBC4 344 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 VWA5B1Q5TIE3 1220 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 FAM171A1Q5VUB5 890 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 DCAF12L2Q5VW00 463 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 C9orf57Q5W0N0 161 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 FAM217AQ8IXS0 508 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 TCP11L2Q8N4U5 519 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 RAB40AQ8WXH6 277 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 ZUFSPQ96AP4 578 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 LBHD1Q9BQE6 289 aaPredicted RBP3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 CADM1Q9BY67 442 aaKnown RBP3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 UNC45AQ9H3U1 944 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 EPHX3Q9H6B9 360 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 TTC12Q9H892 705 aaPredicted RBP3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 ZNF304Q9HCX3 659 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 ALKBH4Q9NXW9 302 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 CNOT7Q9UIV1 285 aaKnown RBP3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 CYP46A1Q9Y6A2 500 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 DOCK7Q96N67 2140 aa3.8□□□□□ -1.8
TMEM50B-208ENST00000474272 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 DDAH2O95865 285 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 F9P00740 461 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 DDIT3P35638 169 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 RASSF2P50749 326 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 CYP2J2P51589 502 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 RPP30P78346 268 aaKnown RBP3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 KIF5AQ12840 1032 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 DDX10Q13206 875 aaKnown RBP3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 SIM2Q14190 667 aaPredicted RBP3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 RPE65Q16518 533 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 SLC18A3Q16572 532 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 ZNF718Q3SXZ3 478 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 C5orf22Q49AR2 442 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 FBXO43Q4G163 708 aa3.79□□□□□ -1.8
TMEM50B-208ENST00000474272 OTUD1Q5VV17 481 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms