RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 WNT1P04628 370 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 COMTP21964 271 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 KDELR1P24390 212 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 SERPINB6P35237 376 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 AFF3P51826 1226 aaKnown RBP19.19■□□□□ 0.66
PTCD3-210ENST00000473829 SLC10A7Q0GE19 358 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 GDPD4Q6W3E5 623 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 ACRBPQ8NEB7 543 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 OSBPL1AQ9BXW6 950 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 IMPACTQ9P2X3 320 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 GGT7Q9UJ14 662 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 ZFR2Q9UPR6 939 aaKnown RBP19.19■□□□□ 0.66
PTCD3-210ENST00000473829 ITM2BQ9Y287 266 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 FADS3Q9Y5Q0 445 aa19.19■□□□□ 0.66
PTCD3-210ENST00000473829 CACNA1AO00555 2505 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 A0A1W2PQU0 124 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 SYPP08247 313 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 NOP2P46087 812 aaKnown RBP19.18■□□□□ 0.66
PTCD3-210ENST00000473829 GRIA4P48058 902 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 PAFAH1B3Q15102 231 aaKnown RBP19.18■□□□□ 0.66
PTCD3-210ENST00000473829 UAP1L1Q3KQV9 507 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 LRRC73Q5JTD7 316 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 ZFYVE27Q5T4F4 411 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 TMCO4Q5TGY1 634 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 FBXL19Q6PCT2 694 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 DGLUCYQ7Z3D6 616 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 ATPAF2Q8N5M1 289 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 KLK6Q92876 244 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 NSMCE3Q96MG7 304 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 BAG1Q99933 345 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-210ENST00000473829 ANP32EQ9BTT0 268 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 CINPQ9BW66 212 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-210ENST00000473829 IL21RQ9HBE5 538 aa19.18■□□□□ 0.66
PTCD3-210ENST00000473829 A0A0A6YYK5 440 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 A0A1W2PR77 199 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 LRRD1A4D1F6 860 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 KRT1P04264 644 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 TNNT1P13805 278 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 PRLRP16471 622 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 SLC1A1P43005 524 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 ATXN3P54252 364 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 RACK1P63244 317 aaKnown RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 GBE1Q04446 702 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 RFTN1Q14699 578 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 LBRQ14739 615 aaKnown RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 KIF19Q2TAC6 998 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 ZNF284Q2VY69 593 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 SEL1L3Q68CR1 1132 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 MAP7D3Q8IWC1 876 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 PGBD5Q8N414 524 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 SERAC1Q96JX3 654 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 ZNF599Q96NL3 588 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 CPEB1Q9BZB8 566 aaKnown RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 DNAAF2Q9NVR5 837 aaKnown RBP19.17■□□□□ 0.66
PTCD3-210ENST00000473829 CA5BQ9Y2D0 317 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 SNX11Q9Y5W9 270 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 TRPM6Q9BX84 2022 aa19.17■□□□□ 0.66
PTCD3-210ENST00000473829 TTC24A2A3L6 582 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-210ENST00000473829 AP1G1O43747 822 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 SPOPO43791 374 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 PCDH8O95206 1070 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 RAD51Q06609 339 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 CCDC15Q0P6D6 951 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 GALNT2Q10471 571 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 SLC10A2Q12908 348 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-210ENST00000473829 FGL2Q14314 439 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 TMEM259Q4ZIN3 620 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 LRRC38Q5VT99 294 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 NAPEPLDQ6IQ20 393 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 NEK5Q6P3R8 708 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 SRLQ86TD4 932 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 PRPF39Q86UA1 669 aaKnown RBP19.16■□□□□ 0.66
PTCD3-210ENST00000473829 HORMAD1Q86X24 394 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 ZSWIM9Q86XI8 627 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 RHOT1Q8IXI2 618 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 LRRN4Q8WUT4 740 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 RNF157Q96PX1 679 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 PSKH2Q96QS6 385 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 MYOCQ99972 504 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 ZDHHC5Q9C0B5 715 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 LACRTQ9GZZ8 138 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 AASDHPPTQ9NRN7 309 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 SEPT3Q9UH03 358 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 TPX2Q9ULW0 747 aaKnown RBP19.16■□□□□ 0.66
PTCD3-210ENST00000473829 ANKRD6Q9Y2G4 727 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 ALG6Q9Y672 507 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 DUSP10Q9Y6W6 482 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 KNL1Q8NG31 2342 aa19.16■□□□□ 0.66
PTCD3-210ENST00000473829 TSPAN11A1L157 253 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 VILLO15195 856 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 ITIH2P19823 946 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 GARSP41250 739 aaKnown RBP19.15■□□□□ 0.66
PTCD3-210ENST00000473829 CSNK1DP48730 415 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 TEAD4Q15561 434 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 HLA-BQ31612 363 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 SETMARQ53H47 684 aaPredicted RBP19.15■□□□□ 0.66
PTCD3-210ENST00000473829 C11orf63Q6NUN7 778 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 CAMK1DQ8IU85 385 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 PLD5Q8N7P1 536 aa19.15■□□□□ 0.66
PTCD3-210ENST00000473829 GAREM1Q9H706 876 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms