RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CFAP69A5D8W1 941 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 MUSKO15146 869 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 INSIG1O15503 277 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 HRO43593 1189 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 SOCS5O75159 536 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 JCHAINP01591 159 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 RGRP47804 291 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 SLC14A2Q15849 920 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 PAPD7Q5XG87 772 aaKnown RBP20.22■□□□□ 0.83
SF1-213ENST00000472725 NCEH1Q6PIU2 408 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 HDDC3Q8N4P3 179 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 AADATQ8N5Z0 425 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 ATOH1Q92858 354 aaPredicted RBP20.22■□□□□ 0.83
SF1-213ENST00000472725 RAB7BQ96AH8 199 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 VOPP1Q96AW1 172 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 ZC3H10Q96K80 434 aaKnown RBP20.22■□□□□ 0.83
SF1-213ENST00000472725 EXOC2Q96KP1 924 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 OSBPL9Q96SU4 736 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 NAPGQ99747 312 aaPredicted RBP20.22■□□□□ 0.83
SF1-213ENST00000472725 BTBD1Q9H0C5 482 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 SUV39H2Q9H5I1 410 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 CYP8B1Q9UNU6 501 aa20.22■□□□□ 0.83
SF1-213ENST00000472725 TSPAN11A1L157 253 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 CTAGE9A4FU28 777 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 RNASEH2AO75792 299 aaKnown RBP20.21■□□□□ 0.83
SF1-213ENST00000472725 STK10O94804 968 aaKnown RBP20.21■□□□□ 0.83
SF1-213ENST00000472725 FGGP02679 453 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 TUBB4AP04350 444 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 PTPN3P26045 913 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 CXCR5P32302 372 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 DRD3P35462 400 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 NBL1P41271 181 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 ETF1P62495 437 aaKnown RBP20.21■□□□□ 0.83
SF1-213ENST00000472725 BCL2L1Q07817 233 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 CCNG2Q16589 344 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 DRICH1Q6PGQ1 229 aaPredicted RBP20.21■□□□□ 0.83
SF1-213ENST00000472725 DARS2Q6PI48 645 aaKnown RBP20.21■□□□□ 0.83
SF1-213ENST00000472725 BRAT1Q6PJG6 821 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 ERN2Q76MJ5 926 aaKnown RBP20.21■□□□□ 0.83
SF1-213ENST00000472725 CADM4Q8NFZ8 388 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 OR6K2Q8NGY2 324 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 GANCQ8TET4 914 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 TEKT5Q96M29 485 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 EPC1Q9H2F5 836 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 ANKRD36A6QL64 1941 aa20.21■□□□□ 0.83
SF1-213ENST00000472725 A0A1W2PP55 124 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 TCRBV7S2A1N4TA0A589 114 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 NDUFS2O75306 463 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 RHOBTB1O94844 696 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 HLA-DQB2P05538 268 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 UGT2B4P06133 528 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 SERPINF2P08697 491 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 CA4P22748 312 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 STIP1P31948 543 aaKnown RBP20.2■□□□□ 0.82
SF1-213ENST00000472725 NEK3P51956 506 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 POLR2LP62875 67 aaKnown RBP20.2■□□□□ 0.82
SF1-213ENST00000472725 ITKQ08881 620 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 WASHC5Q12768 1159 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 ZBTB17Q13105 803 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 LONRF2Q1L5Z9 754 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 NEK5Q6P3R8 708 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 CEP68Q76N32 757 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 ZSCAN30Q86W11 494 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 CACUL1Q86Y37 369 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 CNTD1Q8N815 330 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 ACTRT1Q8TDG2 376 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 RLN3Q8WXF3 142 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 NKD2Q969F2 451 aaPredicted RBP20.2■□□□□ 0.82
SF1-213ENST00000472725 ARRDC3Q96B67 414 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 TOE1Q96GM8 510 aaKnown RBP20.2■□□□□ 0.82
SF1-213ENST00000472725 ZNF419Q96HQ0 510 aaPredicted RBP20.2■□□□□ 0.82
SF1-213ENST00000472725 KLHL32Q96NJ5 620 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 WDR24Q96S15 920 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 SEMA3CQ99985 751 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 DUSP15Q9H1R2 295 aaPredicted RBP20.2■□□□□ 0.82
SF1-213ENST00000472725 NEUROG2Q9H2A3 272 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 NOD2Q9HC29 1040 aa20.2■□□□□ 0.82
SF1-213ENST00000472725 CACNA1HO95180 2353 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 LRRC72A6NJI9 287 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 MAP3K13O43283 966 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 HTRA2O43464 458 aaPredicted RBP20.19■□□□□ 0.82
SF1-213ENST00000472725 AP1G1O43747 822 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 NFKBIAP25963 317 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 RBL1P28749 1068 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 MAXP61244 160 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 CNTN1Q12860 1018 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 SIM2Q14190 667 aaPredicted RBP20.19■□□□□ 0.82
SF1-213ENST00000472725 ELF2Q15723 593 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 CFAP58Q5T655 872 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 PIP5KL1Q5T9C9 394 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 AGBL4Q5VU57 503 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 FBXL19Q6PCT2 694 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 ARRDC2Q8TBH0 407 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 LRRN4Q8WUT4 740 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 FOXJ1Q92949 421 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 ECHDC3Q96DC8 303 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 LOXL4Q96JB6 756 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 PPP1R2P1Q96PQ5 205 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 SLC25A51Q9H1U9 297 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms